Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq1121 134 8e-27 >seq1121 Length=1158 Score = 134 bits (148), Expect = 8e-27 Identities = 192/265 (72%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 78367 GATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTA-CTTCCAGTCCG 78425 |||| | ||||||||||| ||||| | || ||||| || ||||||| || || || Sbjct 1158 GATTACTATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGCTGATAG-CCA 1100 Query 78426 CACAAATGCGC-AATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTCC 78484 || | || || || | ||| ||| | |||||| || |||||||| ||||| |||| ||| Sbjct 1099 CATATTTGTGCTAACATTAT-TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCC 1041 Query 78485 TAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGATAC 78544 ||| || | || | || ||||| || ||||| ||| || ||| |||| | || || Sbjct 1040 TAAAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAAC 981 Query 78545 GTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGGATT 78604 |||||| || | || ||| ||||| || ||||||||||||| | | || |||||||| Sbjct 980 GTAAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATT 921 Query 78605 CCAAGCAGACACAATATGTCTGCGT 78629 || | || | ||| ||||| ||| Sbjct 920 TCATACTGATAAAATGTGTCTTCGT 896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300154516358200