Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq1191 91.5 2e-13 seq584 82.4 8e-11 >seq1191 Length=688723 Score = 91.5 bits (100), Expect = 2e-13 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 26912 GCGCAAGTGGCGGAATTGGTAGACGCCCAGGTTTTAGGTACCTGTGCCCTAGTGGCGTGA 26971 || || |||| ||||||||||||| | ||||||| |||||||||||| | ||||||| Sbjct 479944 GCCCAGGTGGTGGAATTGGTAGACACGCAGGTTTCAGGTACCTGTGCTGCA-AGGCGTGA 479886 Query 26972 AGGTTCAAGTCCTTTCTTGCGCATCAGTCTTTTA 27005 |||||| ||||||||| || ||| || ||||||| Sbjct 479885 AGGTTCGAGTCCTTTCCTGGGCACCA-TCTTTTA 479853 >seq584 Length=6389 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 28885 ATTAGCTCAGC-GGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTC 28943 ||||||||||| |||||||||||||||||||||||||| ||||||| |||||| | ||| Sbjct 2649 ATTAGCTCAGCTGGTAGAGCATCTCGTTTACACCGAGGAGGTCGGCAGTTCAAGTCTGTC 2708 Query 28944 AT 28945 || Sbjct 2709 AT 2710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516470322456000