Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq422 93.3 9e-14 >seq422 Length=7389 Score = 93.3 bits (102), Expect = 9e-14 Identities = 175/253 (69%), Gaps = 6/253 (2%) Strand=Plus/Plus Query 48484 TAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAG 48543 ||| |||||| | |||| || ||||| || |||||||| | ||| ||||||| Sbjct 989 TAATTGCTGGCGCTAAATTCCAAGGTGAGTTTGAAGAACGATTAAAAGCGGTTATTAACC 1048 Query 48544 AACTTAAAAAA-CGA--GAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGG 48600 || ||||||| | | | ||| | ||||| || ||||||||| ||||| | || | | Sbjct 1049 AAATTAAAAATTCTAATGGAAAAATTATTTTATTTATTGATGAACTACATTTAATTGTTG 1108 Query 48601 GTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTT 48660 |||||||| | | || | || || |||||| ||| | | ||||| | Sbjct 1109 GTGCTGGTAGAA-CACAA--GGTTCAATGGATGCTTCTAATTTACTAAAACCAATGTTAG 1165 Query 48661 CACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTG 48720 |||| ||||| | ||| ||| ||||| ||||| ||| |||||||| || |||||| Sbjct 1166 CACGCGGTGAACTACGTTGTATTGGTGCCACAACACTTGACGAATATCGTCAATACATTG 1225 Query 48721 AAAAAGATGCTGC 48733 |||||||||| || Sbjct 1226 AAAAAGATGCAGC 1238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106436349444488