Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq1482 212 2e-50 seq743 205 3e-48 >seq1482 Length=483770 Score = 212 bits (234), Expect = 2e-50 Identities = 458/685 (67%), Gaps = 0/685 (0%) Strand=Plus/Plus Query 45437 ATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGAT 45496 ||| | ||||||| ||| |||| || ||| | | | ||||||||||| | || Sbjct 421378 ATGCACCAATATCACGACCTGCTCGAACGCATTCTCGCCGATGGCGTGGAGAAGCACGAC 421437 Query 45497 CGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGAC 45556 || || || || || || ||||||||||||||| |||| |||| || ||| | Sbjct 421438 CGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAATTTGGCCGCA 421497 Query 45557 GGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTC 45616 ||||||||||| | |||||||| ||| | || |||||| | |||| |||||| Sbjct 421498 GGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCGTCCATGAGCTGCTC 421557 Query 45617 TGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGG 45676 |||||| | || ||||| || || | || | |||| | || || |||| ||| Sbjct 421558 TGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACGGCGTCTCGATCTGG 421617 Query 45677 GACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCG 45736 || |||||||| || || |||||||||||||| || |||| || |||| ||||| || Sbjct 421618 GATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTTCGCAGTGGCGTTCA 421677 Query 45737 TGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAG 45796 ||| | | | ||||| | |||| || || || ||| | || ||| | Sbjct 421678 TGGCCCGCGCCGGACGGCCGCAGCATCGATCAGATCGCCAACGTCGTCGAGATGATCCGG 421737 Query 45797 CGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAA 45856 ||||| ||| | ||||||||| || | || |||||||| || || | | | Sbjct 421738 CGCAATCCGGATTCGCGGCGGCTGATCGTCTCGGCGTGGAATCCCGCCGAGGTCGATAAG 421797 Query 45857 ATGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCA 45916 ||| | ||||||| || |||| | |||||||| || ||||| || ||| |||| Sbjct 421798 ATGGCGCTGCCCCCGTGCCATTGCCTGTTTCAGTTCTATGTCGCCAACGGCAAACTGTCG 421857 Query 45917 TGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGC 45976 ||| | | ||||| || | ||| || || || ||||||| |||||||| | Sbjct 421858 TGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGGCGTGCCGTTCAACATCGCATCC 421917 Query 45977 TATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATT 46036 ||||||||| |||| ||||| || || || | | | | |||||| ||||| Sbjct 421918 TATGCGCTGCTGACGATGATGGTCGCACAGGTCACCGGCTTGAAAGCGGGCGAATTCATT 421977 Query 46037 TTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTG 46096 ||| || |||| ||| | || |||||||||||||| ||| | |||| || Sbjct 421978 CACACGCTGGGTGACGCGCATCTTTATTCCAATCATCTGGAACAGGCGCGATTGCAATTG 422037 Query 46097 ACGCGCGAGCCGCGCCCGCTGCCGA 46121 ||||||| ||||||| | |||||| Sbjct 422038 ACGCGCGCGCCGCGCGCATTGCCGA 422062 >seq743 Length=263205 Score = 205 bits (226), Expect = 3e-48 Identities = 434/645 (67%), Gaps = 2/645 (0%) Strand=Plus/Minus Query 45477 ACGGCGTGGAGAAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGC 45536 |||||| |||| | || || || || || || || ||||||||||||| | |||| Sbjct 73500 ACGGCGCACAGAAGGGCGACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGA 73441 Query 45537 TGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCT 45596 ||||||| ||| | | ||| || ||| | |||||| |||||| ||| || Sbjct 73440 TGCGCTTCAACCTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGG 73381 Query 45597 CGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGG 45656 |||| | | |||||||| |||||| | ||||| || || || |||||| ||||| Sbjct 73380 CGATTGTCCACGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGA 73321 Query 45657 AGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCT 45716 | |||||||| || || |||||||||||||| || | ||||| ||||| || || ||| Sbjct 73320 ATAATGGTGTCACCATCTGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCT 73261 Query 45717 ACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGG 45776 ||||| ||| ||||| || ||| | | | | || || | ||||||| || ||| Sbjct 73260 ACGGCAAGCAGTGGCGCTCATGGCAGGCGCCGGATGGCCGCAGCATCGACCAGATCGCGA 73201 Query 45777 CGGTCTTTAAGGAAATCAAGCGCAAC-CCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGG 45835 || | ||| || | || ||| | ||||||||| || | || ||||| ||| Sbjct 73200 ACCTCATCCGCATGATC-CGCACCACGCCGGATTCGCGGCGGCTGATCGTCAGCGCATGG 73142 Query 45836 AACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTAC 45895 || ||| | | | | ||| | |||| ||||| |||| | || ||||| ||| Sbjct 73141 AATCCGGCCGATGTCGATCACATGGCGCTGCCGCCATGCCATTGCCTGTTCCAGTTCTAC 73082 Query 45896 GTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGA 45955 |||||||| ||| | || ||| | | |||||||| | ||| ||||| || Sbjct 73081 GTCGCGAACGGCAAACTCTCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGC 73022 Query 45956 TTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGAC 46015 ||||||| |||||||| |||||||||| |||| ||| | || || || Sbjct 73021 GTGCCGTTCAACATCGCGTCCTATGCGCTGCTGACGATGATGATCGCACAGGTGACGGAT 72962 Query 46016 CTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTG 46075 || | ||||| |||| ||| |||||||| ||| |||| || |||||| Sbjct 72961 CTTGCGCCGGGCGATTTCATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTG 72902 Query 46076 GAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCG 46120 || || ||| ||||| |||||||| ||||||| |||||||| Sbjct 72901 GAGCAGGCGCGCCTGCAACTGACGCGGCGGCCGCGCGCGCTGCCG 72857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157747591944286