Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq1095 129 2e-25 >seq1095 Length=1089284 Score = 129 bits (142), Expect = 2e-25 Identities = 345/519 (66%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 485 TATCGTGGTGCTCACGGTGGACGTGGATCTGCTAAGACGCGTACTTTTGCACTAATGACT 544 ||||| || ||| |||| || ||||| ||||| |||||||| | ||||| ||| | Sbjct 164637 TATCGAGGGGCTTACGGCGGTCGTGGTTCTGCCAAGACGCGATCATTTGCCAAGATGGCG 164696 Query 545 GCCGTCAAAGCGTATCAAGCGGCAGAAGCCAAT-ATCAGTGGAGTTATCCTGTGCGCTCG 603 || || | || | || |||||||| | | | || || || | |||| || Sbjct 164697 GCGGTTTGGGGGTTGCGTTTCGCGCAAGCCAATGAGCCG-GGCGTGATTGTCTGCGGCCG 164755 Query 604 AGAATACATGAACTCGCTGGAAGAATCCTCCATGGAGGAGGTAAAGCAGGCAATTCGCTC 663 ||||||||||||||||||||| || || |||| ||||| ||| || ||| ||| Sbjct 164756 AGAATACATGAACTCGCTGGATGAGAGTTCGATGGCTGAGGTCAAGGCCGCGATTGCCTC 164815 Query 664 CGTGGCGTGGCTTGACGATTACTTCGACATTGGAGAGAAATACATCAGGACAAAGAACCG 723 | | ||||||| | || || |||| ||||| ||||||||||| | | || Sbjct 164816 TGAGCCGTGGCTGTCGGCGGCCTATGATGTTGGCGAGAAGTACATCAGGACGGCGGATCG 164875 Query 724 CAAGGTCAGCTATGTATTCTGCGGTCTTCGCCATAACCTAGACAGCATCAAATCAAAAGC 783 |||| | || || || || || |||||||| ||||| |||||||| || | Sbjct 164876 TCGGGTCGATTTTGCGTTTATTGGGCTGCGGCATAACCTGGACAGTATCAAATCGAAGTC 164935 Query 784 GCGAATTC--TTGTAGCCTGGGTTGACGAGGCCGAGTCTGTTTCTTCGACTGCGTGGA-A 840 || |||| ||| | |||||||| || || ||| | || || | ||||||| Sbjct 164936 TCGTATTCGGCTGTTG--TGGGTTGATGAAGCGGAGCCGGTGTCGGAATCGGCGTGGATG 164993 Query 841 AAAGCTTCGCCCGACCGTTCGTGAAGAAGGCTCAGAAATCTGGGTTACGTGGAACCCGGA 900 ||||| |||||| || || || || || || || || ||||| |||||||| || || Sbjct 164994 AAAGC-GATCCCGACAGTCCGCGAGGATGGGTCTGAGATTTGGGTGACGTGGAATCCAGA 165052 Query 901 G---AAGGACGGCAGCGCCACCGACAAACTTTTCAGAAAGAATCCCCCAAAAAGCTCAAT 957 | ||| | |||||| ||| |||| | || | ||| || || |||| || | Sbjct 165053 GCGCAAGAA---CAGCGCGACCCACAAGCGGTTTCGTGAGAGCCCGCCCGAAAGTTCGAA 165109 Query 958 TATTGTCGAGATGAACTATGTTGACAATCCATGGTTCCC 996 || ||||| |||||| || ||||| ||||| || Sbjct 165110 GATCGTCGAATTGAACTGGCGAGATAATCCGTGGTTTCC 165148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151411704729046