Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019545.1
Length=47355
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 129 2e-25
>seq1095
Length=1089284
Score = 129 bits (142), Expect = 2e-25
Identities = 345/519 (66%), Gaps = 14/519 (3%)
Strand=Plus/Plus
Query 485 TATCGTGGTGCTCACGGTGGACGTGGATCTGCTAAGACGCGTACTTTTGCACTAATGACT 544
||||| || ||| |||| || ||||| ||||| |||||||| | ||||| ||| |
Sbjct 164637 TATCGAGGGGCTTACGGCGGTCGTGGTTCTGCCAAGACGCGATCATTTGCCAAGATGGCG 164696
Query 545 GCCGTCAAAGCGTATCAAGCGGCAGAAGCCAAT-ATCAGTGGAGTTATCCTGTGCGCTCG 603
|| || | || | || |||||||| | | | || || || | |||| ||
Sbjct 164697 GCGGTTTGGGGGTTGCGTTTCGCGCAAGCCAATGAGCCG-GGCGTGATTGTCTGCGGCCG 164755
Query 604 AGAATACATGAACTCGCTGGAAGAATCCTCCATGGAGGAGGTAAAGCAGGCAATTCGCTC 663
||||||||||||||||||||| || || |||| ||||| ||| || ||| |||
Sbjct 164756 AGAATACATGAACTCGCTGGATGAGAGTTCGATGGCTGAGGTCAAGGCCGCGATTGCCTC 164815
Query 664 CGTGGCGTGGCTTGACGATTACTTCGACATTGGAGAGAAATACATCAGGACAAAGAACCG 723
| | ||||||| | || || |||| ||||| ||||||||||| | | ||
Sbjct 164816 TGAGCCGTGGCTGTCGGCGGCCTATGATGTTGGCGAGAAGTACATCAGGACGGCGGATCG 164875
Query 724 CAAGGTCAGCTATGTATTCTGCGGTCTTCGCCATAACCTAGACAGCATCAAATCAAAAGC 783
|||| | || || || || || |||||||| ||||| |||||||| || |
Sbjct 164876 TCGGGTCGATTTTGCGTTTATTGGGCTGCGGCATAACCTGGACAGTATCAAATCGAAGTC 164935
Query 784 GCGAATTC--TTGTAGCCTGGGTTGACGAGGCCGAGTCTGTTTCTTCGACTGCGTGGA-A 840
|| |||| ||| | |||||||| || || ||| | || || | |||||||
Sbjct 164936 TCGTATTCGGCTGTTG--TGGGTTGATGAAGCGGAGCCGGTGTCGGAATCGGCGTGGATG 164993
Query 841 AAAGCTTCGCCCGACCGTTCGTGAAGAAGGCTCAGAAATCTGGGTTACGTGGAACCCGGA 900
||||| |||||| || || || || || || || || ||||| |||||||| || ||
Sbjct 164994 AAAGC-GATCCCGACAGTCCGCGAGGATGGGTCTGAGATTTGGGTGACGTGGAATCCAGA 165052
Query 901 G---AAGGACGGCAGCGCCACCGACAAACTTTTCAGAAAGAATCCCCCAAAAAGCTCAAT 957
| ||| | |||||| ||| |||| | || | ||| || || |||| || |
Sbjct 165053 GCGCAAGAA---CAGCGCGACCCACAAGCGGTTTCGTGAGAGCCCGCCCGAAAGTTCGAA 165109
Query 958 TATTGTCGAGATGAACTATGTTGACAATCCATGGTTCCC 996
|| ||||| |||||| || ||||| ||||| ||
Sbjct 165110 GATCGTCGAATTGAACTGGCGAGATAATCCGTGGTTTCC 165148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151411704729046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |