Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq97 113 1e-20
>seq97
Length=479585
Score = 113 bits (124), Expect = 1e-20
Identities = 227/334 (68%), Gaps = 11/334 (3%)
Strand=Plus/Minus
Query 5250 CCGGCTTCCGGCCACGTCCTGCACTTCATCGACTGGGCGAAGATTGAACTCACCAAAGAC 5309
||||| | || |||||||| | || |||||| | ||| |||||| || |||
Sbjct 247464 CCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAGGAC 247405
Query 5310 ACGCTGGGCCGCTATATCCTGGCGAACCCAGCGGCCCTGACTGGCCCTACCCTTTGGGGC 5369
|| | |||||| || ||| | | ||||| || || || || ||||| |||||
Sbjct 247404 ACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGGGGT 247345
Query 5370 CTGCCGGTGGTAGCAACCGAAGCC---GCAGCATTCCAGGGCAAGTTCCTGACCGGTGCA 5426
|||||||| || | ||| | ||| || ||| ||||||||||| |||||||||
Sbjct 247344 CTGCCGGTTGTCACGACCCAGGCCATGGCCGCA------GGCAAGTTCCTCACCGGTGCA 247291
Query 5427 TTCAACGCTGCG-GCACAGCTGTTTGACCGTGAAGACGCCAACGTGGTGATCTCCACTGA 5485
||||| |||| | || ||| | || ||||| | || ||| | || | || ||
Sbjct 247290 TTCAA-GCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGA 247232
Query 5486 GAACGCCGACGACTTTGAGAAAAACATGATCTCGATTCGCTGTGAAGAGCGTCTGGCCCT 5545
||||| |||||||| || ||| | || | || | | ||||||||||| || ||
Sbjct 247231 GAACGAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCT 247172
Query 5546 GGCGGTGAAACGCCCTGAGGCGTTCATCTACGGC 5579
||| || | || || || |||||||||||||||
Sbjct 247171 GGCCGTCTATCGTCCAGAAGCGTTCATCTACGGC 247138
Score = 98.7 bits (108), Expect = 2e-16
Identities = 124/168 (74%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 1101 CTCGATGGTCTGAACATCCA-CTGCGCTATCGTAGACGAGCTGCATGCTCACAAAACCCG 1159
|| ||||||||||| ||||| ||| || || || |||||||| ||||||||||| | |||
Sbjct 251393 CTGGATGGTCTGAATATCCATCTG-GCGATAGTGGACGAGCTTCATGCTCACAAGAACCG 251335
Query 1160 TGACGTCTGGGACGTTCTGGAGACGGCAACCGGTGCGCGTCTGCAATCGCTGCTTTTCGG 1219
|| || | ||||| ||||| || | ||| ||||| ||| ||| |||| |
Sbjct 251334 CGATGTTTATGACGTGCTGGAAACTGGCCTCGGCAAGCGTCCGCAGTCGATGCTCTGGAT 251275
Query 1220 TATCACCACCGCCGGTTTCAACAAAGAAGGCATCTGCTACGAATTGCG 1267
|||||||| || || ||||||| | || ||||||||||| ||||
Sbjct 251274 GATCACCACGGCGGGCAGCAACAAACACGGTATCTGCTACGAGGTGCG 251227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120180260678166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |