Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq97 113 1e-20 >seq97 Length=479585 Score = 113 bits (124), Expect = 1e-20 Identities = 227/334 (68%), Gaps = 11/334 (3%) Strand=Plus/Minus Query 5250 CCGGCTTCCGGCCACGTCCTGCACTTCATCGACTGGGCGAAGATTGAACTCACCAAAGAC 5309 ||||| | || |||||||| | || |||||| | ||| |||||| || ||| Sbjct 247464 CCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAGGAC 247405 Query 5310 ACGCTGGGCCGCTATATCCTGGCGAACCCAGCGGCCCTGACTGGCCCTACCCTTTGGGGC 5369 || | |||||| || ||| | | ||||| || || || || ||||| ||||| Sbjct 247404 ACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGGGGT 247345 Query 5370 CTGCCGGTGGTAGCAACCGAAGCC---GCAGCATTCCAGGGCAAGTTCCTGACCGGTGCA 5426 |||||||| || | ||| | ||| || ||| ||||||||||| ||||||||| Sbjct 247344 CTGCCGGTTGTCACGACCCAGGCCATGGCCGCA------GGCAAGTTCCTCACCGGTGCA 247291 Query 5427 TTCAACGCTGCG-GCACAGCTGTTTGACCGTGAAGACGCCAACGTGGTGATCTCCACTGA 5485 ||||| |||| | || ||| | || ||||| | || ||| | || | || || Sbjct 247290 TTCAA-GCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGA 247232 Query 5486 GAACGCCGACGACTTTGAGAAAAACATGATCTCGATTCGCTGTGAAGAGCGTCTGGCCCT 5545 ||||| |||||||| || ||| | || | || | | ||||||||||| || || Sbjct 247231 GAACGAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCT 247172 Query 5546 GGCGGTGAAACGCCCTGAGGCGTTCATCTACGGC 5579 ||| || | || || || ||||||||||||||| Sbjct 247171 GGCCGTCTATCGTCCAGAAGCGTTCATCTACGGC 247138 Score = 98.7 bits (108), Expect = 2e-16 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 1101 CTCGATGGTCTGAACATCCA-CTGCGCTATCGTAGACGAGCTGCATGCTCACAAAACCCG 1159 || ||||||||||| ||||| ||| || || || |||||||| ||||||||||| | ||| Sbjct 251393 CTGGATGGTCTGAATATCCATCTG-GCGATAGTGGACGAGCTTCATGCTCACAAGAACCG 251335 Query 1160 TGACGTCTGGGACGTTCTGGAGACGGCAACCGGTGCGCGTCTGCAATCGCTGCTTTTCGG 1219 || || | ||||| ||||| || | ||| ||||| ||| ||| |||| | Sbjct 251334 CGATGTTTATGACGTGCTGGAAACTGGCCTCGGCAAGCGTCCGCAGTCGATGCTCTGGAT 251275 Query 1220 TATCACCACCGCCGGTTTCAACAAAGAAGGCATCTGCTACGAATTGCG 1267 |||||||| || || ||||||| | || ||||||||||| |||| Sbjct 251274 GATCACCACGGCGGGCAGCAACAAACACGGTATCTGCTACGAGGTGCG 251227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120180260678166