Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq1482 143 4e-29
seq890 132 7e-26
seq910 102 1e-16
seq827 102 1e-16
seq743 98.7 2e-15
seq998 95.1 2e-14
>seq1482
Length=483770
Score = 143 bits (158), Expect = 4e-29
Identities = 189/259 (73%), Gaps = 11/259 (4%)
Strand=Plus/Plus
Query 122415 AAGCA-GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGC-----T 122468
||||| ||||| || ||||| || || |||||| | |||||| || | |||| |
Sbjct 421429 AAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAAT 421488
Query 122469 TTGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCA 122528
||| || ||| || ||||||||| ||||||| || ||| | |||| || |||
Sbjct 421489 TTGGCC-GCA----GGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCG 421543
Query 122529 TCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACA 122588
|||||||||| || ||||| || | |||||| ||||||||| |||| || || ||| ||
Sbjct 421544 TCCATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACG 421603
Query 122589 ACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTA 122648
|||| ||||||||||| ||||| || || | || ||||||| ||||| || |||
Sbjct 421604 GCGTCTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTT 421663
Query 122649 AGCAATGGCGTGAGTGGCC 122667
||| |||||| |||||
Sbjct 421664 CGCAGTGGCGTTCATGGCC 421682
>seq890
Length=125401
Score = 132 bits (146), Expect = 7e-26
Identities = 175/240 (73%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGG-CGCACAAATGCGCTTTGACCTGCA 122478
||||| || ||||| ||||||||| | ||||| ||| || || |||||||| |||
Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGC-CAGATTCGCTTTGATCTGGC 47663
Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538
|| || ||||| | | || ||||| ||| | ||||| || || |||||| || ||
Sbjct 47662 CAAGGGCTTCCCCGTCCTGACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACT 47603
Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598
||||||||||| ||||| ||||||||| | || || || ||| |||| | ||
Sbjct 47602 GCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCAT 47543
Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658
|||||||||||||||||| | || || | || ||||| || || || ||||| |||||
Sbjct 47542 CTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGCG 47483
Score = 84.2 bits (92), Expect = 3e-11
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 123076 CTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCCTC 123135
||| |||||||||||||| || || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct 47299 CTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTC 47240
Query 123136 TTACGCGCTCCTGATACACATGTTTGCCCAG 123166
||||| || |||| | ||| | ||||||
Sbjct 47239 CTACGCCCTGCTGACCCTGATGGTGGCCCAG 47209
>seq910
Length=120163
Score = 102 bits (112), Expect = 1e-16
Identities = 69/76 (91%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792
|||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 47985 GTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 48043
Query 169793 TCAGTCCTGCCATTTT 169808
|| || ||||||||
Sbjct 48044 TCTCTCGCGCCATTTT 48059
>seq827
Length=173386
Score = 102 bits (112), Expect = 1e-16
Identities = 69/76 (91%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791
||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 17721 TGTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 17663
Query 169792 GTCAGTCCTGCCATTT 169807
|||| || |||| ||
Sbjct 17662 GTCACTCGCGCCACTT 17647
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791
||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 17879 TGTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 17821
Query 169792 GTCAGTCCTGCCA 169804
|||| || ||||
Sbjct 17820 GTCACTCGCGCCA 17808
>seq743
Length=263205
Score = 98.7 bits (108), Expect = 2e-15
Identities = 165/239 (69%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479
||||| || |||||||| || |||||| | ||||| || |||||||| ||||
Sbjct 73483 GACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAACCTCGCC 73424
Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539
||||| ||| || |||||||||||| | | || | || |||| || ||
Sbjct 73423 GCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGGCGATTGTCCACGAACTG 73364
Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599
|||||||| ||| ||||| |||||| | | |||||| | | || |||| |||
Sbjct 73363 CTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGTCACCATC 73304
Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658
||||| || ||||| || | | || |||| || ||||| ||||| ||||| |||||
Sbjct 73303 TGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAAGCAGTGGCG 73245
>seq998
Length=1052685
Score = 95.1 bits (104), Expect = 2e-14
Identities = 59/62 (95%), Gaps = 1/62 (2%)
Strand=Plus/Plus
Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792
|||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 499808 GTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 499866
Query 169793 TC 169794
||
Sbjct 499867 TC 499868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777617429120400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |