Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq1482 143 4e-29 seq890 132 7e-26 seq910 102 1e-16 seq827 102 1e-16 seq743 98.7 2e-15 seq998 95.1 2e-14 >seq1482 Length=483770 Score = 143 bits (158), Expect = 4e-29 Identities = 189/259 (73%), Gaps = 11/259 (4%) Strand=Plus/Plus Query 122415 AAGCA-GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGC-----T 122468 ||||| ||||| || ||||| || || |||||| | |||||| || | |||| | Sbjct 421429 AAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAAT 421488 Query 122469 TTGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCA 122528 ||| || ||| || ||||||||| ||||||| || ||| | |||| || ||| Sbjct 421489 TTGGCC-GCA----GGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCG 421543 Query 122529 TCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACA 122588 |||||||||| || ||||| || | |||||| ||||||||| |||| || || ||| || Sbjct 421544 TCCATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACG 421603 Query 122589 ACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTA 122648 |||| ||||||||||| ||||| || || | || ||||||| ||||| || ||| Sbjct 421604 GCGTCTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTT 421663 Query 122649 AGCAATGGCGTGAGTGGCC 122667 ||| |||||| ||||| Sbjct 421664 CGCAGTGGCGTTCATGGCC 421682 >seq890 Length=125401 Score = 132 bits (146), Expect = 7e-26 Identities = 175/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGG-CGCACAAATGCGCTTTGACCTGCA 122478 ||||| || ||||| ||||||||| | ||||| ||| || || |||||||| ||| Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGC-CAGATTCGCTTTGATCTGGC 47663 Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538 || || ||||| | | || ||||| ||| | ||||| || || |||||| || || Sbjct 47662 CAAGGGCTTCCCCGTCCTGACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACT 47603 Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598 ||||||||||| ||||| ||||||||| | || || || ||| |||| | || Sbjct 47602 GCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCAT 47543 Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||||||||||||||||| | || || | || ||||| || || || ||||| ||||| Sbjct 47542 CTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGCG 47483 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 123076 CTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCCTC 123135 ||| |||||||||||||| || || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 47299 CTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTC 47240 Query 123136 TTACGCGCTCCTGATACACATGTTTGCCCAG 123166 ||||| || |||| | ||| | |||||| Sbjct 47239 CTACGCCCTGCTGACCCTGATGGTGGCCCAG 47209 >seq910 Length=120163 Score = 102 bits (112), Expect = 1e-16 Identities = 69/76 (91%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 47985 GTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 48043 Query 169793 TCAGTCCTGCCATTTT 169808 || || |||||||| Sbjct 48044 TCTCTCGCGCCATTTT 48059 >seq827 Length=173386 Score = 102 bits (112), Expect = 1e-16 Identities = 69/76 (91%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 17721 TGTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 17663 Query 169792 GTCAGTCCTGCCATTT 169807 |||| || |||| || Sbjct 17662 GTCACTCGCGCCACTT 17647 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 17879 TGTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 17821 Query 169792 GTCAGTCCTGCCA 169804 |||| || |||| Sbjct 17820 GTCACTCGCGCCA 17808 >seq743 Length=263205 Score = 98.7 bits (108), Expect = 2e-15 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| || |||||||| || |||||| | ||||| || |||||||| |||| Sbjct 73483 GACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAACCTCGCC 73424 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 ||||| ||| || |||||||||||| | | || | || |||| || || Sbjct 73423 GCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGGCGATTGTCCACGAACTG 73364 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 |||||||| ||| ||||| |||||| | | |||||| | | || |||| ||| Sbjct 73363 CTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGTCACCATC 73304 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||| || ||||| || | | || |||| || ||||| ||||| ||||| ||||| Sbjct 73303 TGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAAGCAGTGGCG 73245 >seq998 Length=1052685 Score = 95.1 bits (104), Expect = 2e-14 Identities = 59/62 (95%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 499808 GTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 499866 Query 169793 TC 169794 || Sbjct 499867 TC 499868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777617429120400