Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019933.2 Length=43870 Score E Sequences producing significant alignments: (Bits) Value seq97 452 1e-122 seq743 168 2e-37 >seq97 Length=479585 Score = 452 bits (500), Expect = 1e-122 Identities = 597/826 (72%), Gaps = 9/826 (1%) Strand=Plus/Minus Query 6095 CACCAATGCTGATGGCTCTGCTGGTGCCACCGTGCAGACCACTCGCCTTCCTGGCATTCT 6154 ||| || || | || || | ||| || | || ||||||||||||||||| ||||| || Sbjct 247969 CACGAACGCCGCCGGTTCCGTTGGCGCTGCAGTCCAGACCACTCGCCTTCCGGGCATCCT 247910 Query 6155 GGAACTCCCGCAGCGCCGCATGACCATCCGCAGCCTGCTTGCACAGGGCACGATGGAAGG 6214 ||||| || |||||||| | || ||||| ||||||| | |||||| |||||| || Sbjct 247909 TGAACTGCCTCAGCGCCGTCTTACGATCCGTGACCTGCTTTCGCAGGGCCAGATGGACGG 247850 Query 6215 CAATACGCTGGAATATGTGCGCGAGACGGGCTTCACCAATGCCGCCGCCCCGGTTGCTGA 6274 | | |||||||||| || || | |||||||| ||| ||| || ||||| ||||| Sbjct 247849 CGGTTCGCTGGAATACGTCAAGGAAAAGGGCTTCAACAACAACGCTGCTCCGGTGGCTGA 247790 Query 6275 AGGTGCCCAGAAGCCGGAATCGAGCCTGCGCTTCGACCTGGTGCAGACTTCCGCAAAGGT 6334 |||||| ||||| | || | | | || || ||||| ||| || || ||||| Sbjct 247789 AGGTGCTGCAAAGCCCGGTTCTGACATCCAGTTTGAACTGGTCACGACCTCTGCCAAGGT 247730 Query 6335 GATTGCACACTGGATGAAGGCGTCCCGCCAGATTCTGAGTGACAGCGCCCAGCTACAGAG 6394 || ||||||||||||||||| ||||| ||| | ||| |||| ||||||| | Sbjct 247729 CATCGCACACTGGATGAAGGCATCCCGTCAGGTGCTGTCCGACATTTCCCAGCTTCGTTC 247670 Query 6395 CTTCATCAATGCCCGCCTGCTGCGCGGTTTGGAGGTTGTGGAGGAGAATCAGCTGCTTAA 6454 ||||| || || |||||| |||| ||| ||| || ||||| ||||| || || Sbjct 247669 GATCATCGATCAGCGTCTGCTGTACGGTCTGGCCTATGTCGAAGAGAACCAGCTTCTCAA 247610 Query 6455 CGGCAATGGTACGGGCCAGAATCTGCTGGGCCTCCTGCCGCAGGCCACGGCGTTTGCCGC 6514 ||| |||| || |||||||| ||||| ||| || | |||||||| ||||| ||||| | Sbjct 247609 TGGCGATGGCACCGGCCAGAACCTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGT 247550 Query 6515 CCCGAT---CAC-----TGTT-GCCAATGCCACGGCTGTGGACCGCCTGCGTCTGGCTCT 6565 |||| ||| || |||| || || | | | |||||||| ||| |||| | Sbjct 247549 CCCGGCTGGCACGACCATGCCCGCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGAT 247490 Query 6566 GTTGCAGGCACAGCTGGCCGAGTTCCCGGCTACCGGTATTGTCCTTAACCCGGCAGATTG 6625 | | ||||| ||||| || | ||||| || ||| ||||| | |||| || || Sbjct 247489 GCTTCAGGCCGCTCTGGCTGAATATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTG 247430 Query 6626 GGCCGGCATTGAACTCCTGAAGGACACTCAGGGCCGCTACATCCTGGGTAATCCGCAGGG 6685 | | || ||||||||||||||||| |||||||| |||||| | || || |||||||| Sbjct 247429 GACTTCGATCGAACTCCTGAAGGACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGG 247370 Query 6686 CACCCTGGCCCCAACTCTGTGGGGTCTGCCGGTTGTTGCAACTCAGGCGATGGCTGTGGG 6745 || | || || || || ||||||||||||||||| | || ||||| ||||| | || Sbjct 247369 AACGATTGCTCCGACCCTCTGGGGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGG 247310 Query 6746 CCAGTTCCTGACCGGTGCCTTTGATGCCGGTGCACAGGTCTTTGATCGCTGGGCCGCCCG 6805 | ||||||| |||||||| || | ||||| ||| | || || |||||| || || Sbjct 247309 CAAGTTCCTCACCGGTGCATTCAAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCG 247250 Query 6806 CGTTGAGGTTGCCACCGAGAATCAGGATGACTTCATCAAGAACATGGTCACCATCCTGGC 6865 ||| || || || |||||||| | || ||||||||||||||| | ||||||||||| || Sbjct 247249 CGTCGAAGTCGCAACCGAGAACGAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGC 247190 Query 6866 CGAAGAGCGCTTGGCTCTGGCGGTCTATCGTCCGGAGTCCTTCATC 6911 |||||||| | |||||||| ||||||||||| || | |||||| Sbjct 247189 AGAAGAGCGTCTTGCTCTGGCCGTCTATCGTCCAGAAGCGTTCATC 247144 >seq743 Length=263205 Score = 168 bits (186), Expect = 2e-37 Identities = 383/568 (67%), Gaps = 20/568 (4%) Strand=Plus/Minus Query 6351 AAGGCGTCCCGCCAGATTCTGAGTGACAGCGCCCAGCTACA-GAGCTTCATCAATGCCCG 6409 |||||||| || ||||| || ||| ||||| | | ||||| |||||||||||| Sbjct 16127 AAGGCGTCACGTCAGATCCTTGATGAT-GCGCCTGGTTTGGCGAGCTACATCAATGCCCG 16069 Query 6410 CCTGCTGC-GCGGTTTGGAGGTTGTGGAGGAGAATCAGCTGCTTAACGGCAATGGTACGG 6468 | || | ||| || || | || ||||| | |||||| || | |||||| || || | Sbjct 16068 -CGGCACCTACGGCCTGAAGTTCGTTGAGGAAACTCAGCTTCTGACCGGCAACGGCACTG 16010 Query 6469 GCCAGAATCTGCTGGGCCTCCTGCCGCAGGCCACGGCGTTTGCCGCCCCGATCACTGTTG 6528 | ||||| ||| || | |||||||||| | || | ||| | | ||| | | Sbjct 16009 GTCAGAACCTGAACGGTATTGTGCCGCAGGCTTCTGCTTATGCGCCGTCATTCAACGCGG 15950 Query 6529 CCAATGCCACGGCTGTGGACCGCCTGCGTCTGGCTCTGTTGCAGGCACAGCTGGCCGAGT 6588 | | | |||| | || ||||| || || || |||||||||| ||||| | | Sbjct 15949 CTGACGAACAGGCTATCGATCGCCTTCGCCTCGCCCTGTTGCAGGTTATCCTGGCGAATT 15890 Query 6589 TCCCGGCTACCGGTATTGTCCTTAACCCGGCAGATTGGGCCGGCATTGAACTCCTGAAGG 6648 ||||| | | | | || || ||||||| |||||||| |||||||||| |||| Sbjct 15889 ATCCGGCGTCGGCTTTCGTTCTCAACCCGGTTGATTGGGCACGCATTGAACTGACCAAGG 15830 Query 6649 ACACTCAGGGCCGCTACATCCTGGGTAA-TCCGCAGGGCACC-CTGGCCCCAACTCTGTG 6706 | |||||||| ||||| ||| | || || |||| | | || | | ||| | || || Sbjct 15829 ATACTCAGGGTCGCTATATCGTTGGCAACGCCGC--GTCTCCGATTGGCCCGTCGCTCTG 15772 Query 6707 GGGTCTGCCGGTTGTTGCAACTCAGGCGATGGCTGTGGGCCAGTTCCTGACCGGTGCCTT 6766 | ||| ||||| || | | ||||||||| | | ||| |||||||||| || || || Sbjct 15771 GAATCTCCCGGTGGTGGAGTCGCAGGCGATGACCGCCGGCGAGTTCCTGACGGGCGCGTT 15712 Query 6767 TGATGCCGGTGCACAGGTCTTTGATCGCTGGGCCGCCCGCGTTGAGGTT------GCCAC 6820 || |||||| ||||| || |||||| || | ||||||||| | || Sbjct 15711 CAATCTCGGTGCGCAGGTATTCGATCGCATGG------GTGTTGAGGTTCTTCTGTCGAC 15658 Query 6821 CGAGAATCAGGATGACTTCATCAAGAACATGGTCACCATCCTGGCCGAAGAGCGCTTGGC 6880 ||| || ||| ||||| ||||||||| |||||||| | ||||||||| | || Sbjct 15657 CGAAAACTCGGACGACTTTGAGAAGAACATGTGCACCATCCGAGTGGAAGAGCGCATTGC 15598 Query 6881 TCTGGCGGTCTATCGTCCGGAGTCCTTC 6908 ||||||| ||||| || ||| |||| Sbjct 15597 CTTGGCGGTGTATCGCCCCGAGAGCTTC 15570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140259903241616