Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019933.2
Length=43870
Score E
Sequences producing significant alignments: (Bits) Value
seq97 452 1e-122
seq743 168 2e-37
>seq97
Length=479585
Score = 452 bits (500), Expect = 1e-122
Identities = 597/826 (72%), Gaps = 9/826 (1%)
Strand=Plus/Minus
Query 6095 CACCAATGCTGATGGCTCTGCTGGTGCCACCGTGCAGACCACTCGCCTTCCTGGCATTCT 6154
||| || || | || || | ||| || | || ||||||||||||||||| ||||| ||
Sbjct 247969 CACGAACGCCGCCGGTTCCGTTGGCGCTGCAGTCCAGACCACTCGCCTTCCGGGCATCCT 247910
Query 6155 GGAACTCCCGCAGCGCCGCATGACCATCCGCAGCCTGCTTGCACAGGGCACGATGGAAGG 6214
||||| || |||||||| | || ||||| ||||||| | |||||| |||||| ||
Sbjct 247909 TGAACTGCCTCAGCGCCGTCTTACGATCCGTGACCTGCTTTCGCAGGGCCAGATGGACGG 247850
Query 6215 CAATACGCTGGAATATGTGCGCGAGACGGGCTTCACCAATGCCGCCGCCCCGGTTGCTGA 6274
| | |||||||||| || || | |||||||| ||| ||| || ||||| |||||
Sbjct 247849 CGGTTCGCTGGAATACGTCAAGGAAAAGGGCTTCAACAACAACGCTGCTCCGGTGGCTGA 247790
Query 6275 AGGTGCCCAGAAGCCGGAATCGAGCCTGCGCTTCGACCTGGTGCAGACTTCCGCAAAGGT 6334
|||||| ||||| | || | | | || || ||||| ||| || || |||||
Sbjct 247789 AGGTGCTGCAAAGCCCGGTTCTGACATCCAGTTTGAACTGGTCACGACCTCTGCCAAGGT 247730
Query 6335 GATTGCACACTGGATGAAGGCGTCCCGCCAGATTCTGAGTGACAGCGCCCAGCTACAGAG 6394
|| ||||||||||||||||| ||||| ||| | ||| |||| ||||||| |
Sbjct 247729 CATCGCACACTGGATGAAGGCATCCCGTCAGGTGCTGTCCGACATTTCCCAGCTTCGTTC 247670
Query 6395 CTTCATCAATGCCCGCCTGCTGCGCGGTTTGGAGGTTGTGGAGGAGAATCAGCTGCTTAA 6454
||||| || || |||||| |||| ||| ||| || ||||| ||||| || ||
Sbjct 247669 GATCATCGATCAGCGTCTGCTGTACGGTCTGGCCTATGTCGAAGAGAACCAGCTTCTCAA 247610
Query 6455 CGGCAATGGTACGGGCCAGAATCTGCTGGGCCTCCTGCCGCAGGCCACGGCGTTTGCCGC 6514
||| |||| || |||||||| ||||| ||| || | |||||||| ||||| ||||| |
Sbjct 247609 TGGCGATGGCACCGGCCAGAACCTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGT 247550
Query 6515 CCCGAT---CAC-----TGTT-GCCAATGCCACGGCTGTGGACCGCCTGCGTCTGGCTCT 6565
|||| ||| || |||| || || | | | |||||||| ||| |||| |
Sbjct 247549 CCCGGCTGGCACGACCATGCCCGCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGAT 247490
Query 6566 GTTGCAGGCACAGCTGGCCGAGTTCCCGGCTACCGGTATTGTCCTTAACCCGGCAGATTG 6625
| | ||||| ||||| || | ||||| || ||| ||||| | |||| || ||
Sbjct 247489 GCTTCAGGCCGCTCTGGCTGAATATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTG 247430
Query 6626 GGCCGGCATTGAACTCCTGAAGGACACTCAGGGCCGCTACATCCTGGGTAATCCGCAGGG 6685
| | || ||||||||||||||||| |||||||| |||||| | || || ||||||||
Sbjct 247429 GACTTCGATCGAACTCCTGAAGGACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGG 247370
Query 6686 CACCCTGGCCCCAACTCTGTGGGGTCTGCCGGTTGTTGCAACTCAGGCGATGGCTGTGGG 6745
|| | || || || || ||||||||||||||||| | || ||||| ||||| | ||
Sbjct 247369 AACGATTGCTCCGACCCTCTGGGGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGG 247310
Query 6746 CCAGTTCCTGACCGGTGCCTTTGATGCCGGTGCACAGGTCTTTGATCGCTGGGCCGCCCG 6805
| ||||||| |||||||| || | ||||| ||| | || || |||||| || ||
Sbjct 247309 CAAGTTCCTCACCGGTGCATTCAAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCG 247250
Query 6806 CGTTGAGGTTGCCACCGAGAATCAGGATGACTTCATCAAGAACATGGTCACCATCCTGGC 6865
||| || || || |||||||| | || ||||||||||||||| | ||||||||||| ||
Sbjct 247249 CGTCGAAGTCGCAACCGAGAACGAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGC 247190
Query 6866 CGAAGAGCGCTTGGCTCTGGCGGTCTATCGTCCGGAGTCCTTCATC 6911
|||||||| | |||||||| ||||||||||| || | ||||||
Sbjct 247189 AGAAGAGCGTCTTGCTCTGGCCGTCTATCGTCCAGAAGCGTTCATC 247144
>seq743
Length=263205
Score = 168 bits (186), Expect = 2e-37
Identities = 383/568 (67%), Gaps = 20/568 (4%)
Strand=Plus/Minus
Query 6351 AAGGCGTCCCGCCAGATTCTGAGTGACAGCGCCCAGCTACA-GAGCTTCATCAATGCCCG 6409
|||||||| || ||||| || ||| ||||| | | ||||| ||||||||||||
Sbjct 16127 AAGGCGTCACGTCAGATCCTTGATGAT-GCGCCTGGTTTGGCGAGCTACATCAATGCCCG 16069
Query 6410 CCTGCTGC-GCGGTTTGGAGGTTGTGGAGGAGAATCAGCTGCTTAACGGCAATGGTACGG 6468
| || | ||| || || | || ||||| | |||||| || | |||||| || || |
Sbjct 16068 -CGGCACCTACGGCCTGAAGTTCGTTGAGGAAACTCAGCTTCTGACCGGCAACGGCACTG 16010
Query 6469 GCCAGAATCTGCTGGGCCTCCTGCCGCAGGCCACGGCGTTTGCCGCCCCGATCACTGTTG 6528
| ||||| ||| || | |||||||||| | || | ||| | | ||| | |
Sbjct 16009 GTCAGAACCTGAACGGTATTGTGCCGCAGGCTTCTGCTTATGCGCCGTCATTCAACGCGG 15950
Query 6529 CCAATGCCACGGCTGTGGACCGCCTGCGTCTGGCTCTGTTGCAGGCACAGCTGGCCGAGT 6588
| | | |||| | || ||||| || || || |||||||||| ||||| | |
Sbjct 15949 CTGACGAACAGGCTATCGATCGCCTTCGCCTCGCCCTGTTGCAGGTTATCCTGGCGAATT 15890
Query 6589 TCCCGGCTACCGGTATTGTCCTTAACCCGGCAGATTGGGCCGGCATTGAACTCCTGAAGG 6648
||||| | | | | || || ||||||| |||||||| |||||||||| ||||
Sbjct 15889 ATCCGGCGTCGGCTTTCGTTCTCAACCCGGTTGATTGGGCACGCATTGAACTGACCAAGG 15830
Query 6649 ACACTCAGGGCCGCTACATCCTGGGTAA-TCCGCAGGGCACC-CTGGCCCCAACTCTGTG 6706
| |||||||| ||||| ||| | || || |||| | | || | | ||| | || ||
Sbjct 15829 ATACTCAGGGTCGCTATATCGTTGGCAACGCCGC--GTCTCCGATTGGCCCGTCGCTCTG 15772
Query 6707 GGGTCTGCCGGTTGTTGCAACTCAGGCGATGGCTGTGGGCCAGTTCCTGACCGGTGCCTT 6766
| ||| ||||| || | | ||||||||| | | ||| |||||||||| || || ||
Sbjct 15771 GAATCTCCCGGTGGTGGAGTCGCAGGCGATGACCGCCGGCGAGTTCCTGACGGGCGCGTT 15712
Query 6767 TGATGCCGGTGCACAGGTCTTTGATCGCTGGGCCGCCCGCGTTGAGGTT------GCCAC 6820
|| |||||| ||||| || |||||| || | ||||||||| | ||
Sbjct 15711 CAATCTCGGTGCGCAGGTATTCGATCGCATGG------GTGTTGAGGTTCTTCTGTCGAC 15658
Query 6821 CGAGAATCAGGATGACTTCATCAAGAACATGGTCACCATCCTGGCCGAAGAGCGCTTGGC 6880
||| || ||| ||||| ||||||||| |||||||| | ||||||||| | ||
Sbjct 15657 CGAAAACTCGGACGACTTTGAGAAGAACATGTGCACCATCCGAGTGGAAGAGCGCATTGC 15598
Query 6881 TCTGGCGGTCTATCGTCCGGAGTCCTTC 6908
||||||| ||||| || ||| ||||
Sbjct 15597 CTTGGCGGTGTATCGCCCCGAGAGCTTC 15570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140259903241616
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