Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq422 105 4e-17
seq1355 98.7 6e-15
>seq422
Length=7389
Score = 105 bits (116), Expect = 4e-17
Identities = 310/475 (65%), Gaps = 21/475 (4%)
Strand=Plus/Plus
Query 475788 GTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAG 475847
|||| || |||||||||| || || | || |||||| | |||| || | ||||| |
Sbjct 5631 GTGTTAACCCTGATGAAGTAGTAGCTTTGGGTGCTGCTATTCAAGGAGGAGTATTATCGG 5690
Query 475848 GTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAG 475907
|| || | | | | | || |||| | || |||||||| | |||||||
Sbjct 5691 GT------GATG------TTACTGACGTTTTACTATTAGATGTAACTCCTTTATCATTAG 5738
Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967
|| ||||||| | ||||| | ||||| | || | |||||| || | ||
Sbjct 5739 GTATTGAAACTTTAGGAGGAGTAATGACGCCATTAATCTCTCGTAATACTACTGTTCCTA 5798
Query 475968 GCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAA 476027
||||| ||| |||| ||||| ||| | || |||||| | |||| ||
Sbjct 5799 CTAAAAAGTCACAAGTTTTTTCAACTGCTGAAGACAATCAACCCGCTGTTGATATTAGTG 5858
Query 476028 TCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTG 476087
| || |||| ||| | | | ||||||||||| | ||| || ||| | |
Sbjct 5859 TTTTACAAGGAGAACGTCCACTAGCTAAAGATAATCATTCACTGGGTCGTTTCCAATTAA 5918
Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147
||||| || || || ||||| ||||| ||||||||||||||||||||||| ||||
Sbjct 5919 GTGGTATCGAACCAGCACCAAGAGGTGTTCCACAAATTGAAGTTACTTTTGATATCGATG 5978
Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGAT---AAATCTAGTAACAAGAGTAAAAATA 476204
||||||||| | ||||| |||| ||| ||| ||| || |||| ||||| |
Sbjct 5979 TTAATGGTATTGTATCTGTTAGTGCTAAAGATCTAAAAACTAATA--AAGAACAAAAA-A 6035
Query 476205 TAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGT 476259
| |||||| | |||| |||||| || | | |||| ||||| || |||||
Sbjct 6036 TTACTATT---AGCAATAGTGGTACTTTAAGTAAAGACGAAATTGAAAAAATGGT 6087
Score = 95.1 bits (104), Expect = 8e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
||||| ||||||||||| || || ||||| || |||||| |||| |||||| ||||
Sbjct 4964 GCAGTTATTACTGTTCCTGCTTACTTTAACAATGAACAACGTGAAGCTACTAAAAATGCA 5023
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|||| |||||||| | || || | | |||||||| |||||||| || || || |
Sbjct 5024 GGAATTATTGCAGGATTAAAAGTAGAAAGAATTATTAACGAACCAACTGCTGCTGCCATC 5083
Query 474857 GCTTATGGTCTTGATAA 474873
||||||||| | || ||
Sbjct 5084 GCTTATGGTTTAGACAA 5100
>seq1355
Length=20583
Score = 98.7 bits (108), Expect = 6e-15
Identities = 138/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 297309 TCGTGTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAAT 297368
|||||| | | ||| || |||||||||||||| || || || ||||| | | ||| |
Sbjct 16187 TCGTGTGCCTGATGTGTTTGATTGTTGGTTTGAGTCTGGCTCGATGCCGTTCGCGCAAGT 16246
Query 297369 TCATTATCCTTTTGAAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTT 297428
||| ||||| ||||||||| ||| || || | || ||| ||| |||||
Sbjct 16247 TCACTATCCGTTTGAAAATAAAGAATGGTTCGAGA------AAAATTTCCCTGCGGATTT 16300
Query 297429 TATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTAC 297488
||| || |||| || | ||||||||||| ||||| ||||| | || || ||||| ||
Sbjct 16301 TATCACTGAATATATAGCACAAACAAGAGGATGGTTCTATACGCTTTTTGTGCTTTCCAC 16360
Query 297489 AGCTATATTTAACA 297502
||| ||||| |||
Sbjct 16361 TGCTTTATTTGACA 16374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268114900616852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |