Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020483.1
Length=42084
Score E
Sequences producing significant alignments: (Bits) Value
seq20 132 1e-26
>seq20
Length=12842
Score = 132 bits (146), Expect = 1e-26
Identities = 262/378 (69%), Gaps = 10/378 (3%)
Strand=Plus/Minus
Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560
|||||| || || ||| |||| | | |||| || ||| | ||||||| ||| ||||
Sbjct 6725 AATAGAGCCGTATGCAGCAAACGTATTTATACAGAAGACACTTACAGGTTCATTTGTAGT 6666
Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619
||||||| || |||| |||||| |||||||| || || || ||| | | |
Sbjct 6665 ACGAAATAAATTCTTGCAAAAACTACTAGCAGAAAAAAATCAAGA-CAATGATGAAACAT 6607
Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678
|| || ||| | || | ||| |||||||| ||||||||| || | ||
Sbjct 6606 GGTCCTCAATTTCAACAAATGAG-GGTTCTGTTCAGCATTTAGATTTTCTTAGCAAGCAT 6548
Query 15679 GAAAAAGATACATTTAAAACATCTATA-GAAATTAATCAGCAATGGATAATAGAACATGC 15737
|||||| |||||||||||| | ||| ||| || |||| |||||||| |||||||||||
Sbjct 6547 GAAAAACTGACATTTAAAACAGC-ATACGAACTTGATCAACAATGGATCATAGAACATGC 6489
Query 15738 GGCAGACAGACAACAATTTATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGCTGA 15797
|| ||| | | ||| |||||| ||| ||||||||| | || ||||||| |
Sbjct 6488 AAGTGATAGAACTCCTTATATTTGTCAATCTCAATCAGTAAATCTGTTCTTACCTGCCAA 6429
Query 15798 TGTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATTAAA 15855
||| ||| || | | ||||| | ||||| ||| | |||||||||| | | | |||
Sbjct 6428 TGT--GCATAAACGCTACTTACACAAAATACATATGCTTGCTTGGAAAAAAGGATTAAAA 6371
Query 15856 ACTTTGTATTATTGTAGA 15873
| |||||||| || |||
Sbjct 6370 AGCTTGTATTACTGCAGA 6353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134544804975748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |