Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_020483.1 Length=42084 Score E Sequences producing significant alignments: (Bits) Value seq20 132 1e-26 >seq20 Length=12842 Score = 132 bits (146), Expect = 1e-26 Identities = 262/378 (69%), Gaps = 10/378 (3%) Strand=Plus/Minus Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560 |||||| || || ||| |||| | | |||| || ||| | ||||||| ||| |||| Sbjct 6725 AATAGAGCCGTATGCAGCAAACGTATTTATACAGAAGACACTTACAGGTTCATTTGTAGT 6666 Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619 ||||||| || |||| |||||| |||||||| || || || ||| | | | Sbjct 6665 ACGAAATAAATTCTTGCAAAAACTACTAGCAGAAAAAAATCAAGA-CAATGATGAAACAT 6607 Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678 || || ||| | || | ||| |||||||| ||||||||| || | || Sbjct 6606 GGTCCTCAATTTCAACAAATGAG-GGTTCTGTTCAGCATTTAGATTTTCTTAGCAAGCAT 6548 Query 15679 GAAAAAGATACATTTAAAACATCTATA-GAAATTAATCAGCAATGGATAATAGAACATGC 15737 |||||| |||||||||||| | ||| ||| || |||| |||||||| ||||||||||| Sbjct 6547 GAAAAACTGACATTTAAAACAGC-ATACGAACTTGATCAACAATGGATCATAGAACATGC 6489 Query 15738 GGCAGACAGACAACAATTTATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGCTGA 15797 || ||| | | ||| |||||| ||| ||||||||| | || ||||||| | Sbjct 6488 AAGTGATAGAACTCCTTATATTTGTCAATCTCAATCAGTAAATCTGTTCTTACCTGCCAA 6429 Query 15798 TGTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATTAAA 15855 ||| ||| || | | ||||| | ||||| ||| | |||||||||| | | | ||| Sbjct 6428 TGT--GCATAAACGCTACTTACACAAAATACATATGCTTGCTTGGAAAAAAGGATTAAAA 6371 Query 15856 ACTTTGTATTATTGTAGA 15873 | |||||||| || ||| Sbjct 6370 AGCTTGTATTACTGCAGA 6353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134544804975748