Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq1063 93.3 5e-14
seq1155 84.2 2e-11
seq827 82.4 8e-11
>seq1063
Length=63050
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 13712 CGCGGATGTAATTCAGTGGTAGAATGTCAGCCTTCCAAGCTGAACGTCAGGGGTTCGAGT 13771
||||| |||| ||||| ||||||| |||||| | |||||||||| ||||||||||||| |
Sbjct 34115 CGCGGGTGTAGTTCAGAGGTAGAACGTCAGCTTCCCAAGCTGAATGTCAGGGGTTCGATT 34174
Query 13772 CCCCTTATCCGCTCCA 13787
||||| | ||||||||
Sbjct 34175 CCCCTCACCCGCTCCA 34190
>seq1155
Length=1012
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749
|||| ||| || ||||||||||| ||| | | ||||||| | | ||||||||||||||||
Sbjct 439 CGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGGTTCGAA 498
Query 157750 TCCTGTCACCCCGAC--TTATCAAA 157772
||||||| |||||| |||| |||
Sbjct 499 TCCTGTCTTCCCGACCATTATTAAA 523
>seq827
Length=173386
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749
|||||||||||||||| ||||||||| || ||||||| || ||||| |||||||||
Sbjct 172452 CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGAGGTTCGAA 172511
Query 157750 TCCTGTCACCCCGAC 157764
|||| || |||||||
Sbjct 172512 TCCTCTCGCCCCGAC 172526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547736936586840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |