Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq890 82.4 1e-10 seq733 82.4 1e-10 >seq890 Length=125401 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 74809 GATGAGAGGACTTGAACCTCCACGGATAAATCCACTGGAACCTAAACCCAGCGCGTCTAC 74868 |||||||||||| ||||||||||| | | |||||||||||| |||| |||||||| Sbjct 64530 GATGAGAGGACTCGAACCTCCACGCCTCTCGGCGCTGGAACCTAAATCCAGTGCGTCTAC 64471 Query 74869 CAATTCCGCCACATC 74883 || |||||||||||| Sbjct 64470 CAGTTCCGCCACATC 64456 >seq733 Length=265776 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 74813 AGAGGACTTGAACCTCCACGGA--TAAATCCACTGGAACCTAAACCCAGCGCGTCTACCA 74870 |||||||| |||||||||||| | || ||||||| |||| || ||||||||||||||| Sbjct 227187 AGAGGACTCGAACCTCCACGGCCGTTAAGCCACTGGCACCTGAAGCCAGCGCGTCTACCA 227128 Query 74871 ATTCCGCCA 74879 ||||||||| Sbjct 227127 ATTCCGCCA 227119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633501729538920