Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020840.1
Length=38987
Score E
Sequences producing significant alignments: (Bits) Value
seq743 89.7 1e-13
>seq743
Length=263205
Score = 89.7 bits (98), Expect = 1e-13
Identities = 226/338 (67%), Gaps = 12/338 (4%)
Strand=Plus/Plus
Query 33766 CCGGTGCCGTCACCATTGAGGAGCTGGTTTTCCTCCACCAGCTCCAGGCCATAGCGGAGC 33825
|| ||||||| || | || ||||| ||||||| || | || |||||| ||| | ||
Sbjct 16009 CCAGTGCCGTTGCCGGTCAGAAGCTGAGTTTCCTCAACGAACTTCAGGCCGTAG--GTGC 16066
Query 33826 CGCGTG--TCAATGTAGCTCATCAGCATGGGCGCATCATCGAGGATTTGCACCGTG--GC 33881
|||| | | ||||||||| || ||||||||||| ||||| || |||| ||
Sbjct 16067 CGCGGGCATTGATGTAGCTCGCCAAACCAGGCGCATCATCAAGGATCTG--ACGTGACGC 16124
Query 33882 ATCGATAAAGTGAGCAATGGTGACCACCGGCGAGCGGGTG--AGCTCAAAGGTCAGGTCA 33939
| || | || || || ||| |||||| || | || | | ||||| | ||||
Sbjct 16125 CTTGAAGATATGTGCTATCGTGCGAACCGGC--GCAGATGCCATATTGAAGGTGATGTCA 16182
Query 33940 CTCTGAGGCTTGGTGGTGCCCTCCGGCGTCGGCGCCGCATTGTTGGTGAAACCGGTTTCC 33999
|| |||||||| ||| |||| | ||| || ||||||||||| || ||||||
Sbjct 16183 GACTTGGGCTTGGTCTGGCCTTCCGTCACCGGGCGAGCGTTGTTGGTGAAGCCCGTTTCC 16242
Query 34000 TGGACAAACTCGATGGAGTTTGAGGAGGTCACGCCCTGGGACAGGAGCGCGCGGATGGTC 34059
| ||| | || | | | || | |||| ||| | | || | |||||||||||
Sbjct 16243 TTGACGTATTCAACATTGCTCGACGCGGTCTGACCCGGCGCGAGCAAGTCGCGGATGGTC 16302
Query 34060 AGCGTGCGGTCAGGCGGCGTGATGATGCCCGGGACACG 34097
| | |||| | || |||||||| ||||| || || ||
Sbjct 16303 AACTTGCGCTGCGGAGGCGTGATAATGCCAGGAACGCG 16340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124634581387062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |