Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_020840.1 Length=38987 Score E Sequences producing significant alignments: (Bits) Value seq743 89.7 1e-13 >seq743 Length=263205 Score = 89.7 bits (98), Expect = 1e-13 Identities = 226/338 (67%), Gaps = 12/338 (4%) Strand=Plus/Plus Query 33766 CCGGTGCCGTCACCATTGAGGAGCTGGTTTTCCTCCACCAGCTCCAGGCCATAGCGGAGC 33825 || ||||||| || | || ||||| ||||||| || | || |||||| ||| | || Sbjct 16009 CCAGTGCCGTTGCCGGTCAGAAGCTGAGTTTCCTCAACGAACTTCAGGCCGTAG--GTGC 16066 Query 33826 CGCGTG--TCAATGTAGCTCATCAGCATGGGCGCATCATCGAGGATTTGCACCGTG--GC 33881 |||| | | ||||||||| || ||||||||||| ||||| || |||| || Sbjct 16067 CGCGGGCATTGATGTAGCTCGCCAAACCAGGCGCATCATCAAGGATCTG--ACGTGACGC 16124 Query 33882 ATCGATAAAGTGAGCAATGGTGACCACCGGCGAGCGGGTG--AGCTCAAAGGTCAGGTCA 33939 | || | || || || ||| |||||| || | || | | ||||| | |||| Sbjct 16125 CTTGAAGATATGTGCTATCGTGCGAACCGGC--GCAGATGCCATATTGAAGGTGATGTCA 16182 Query 33940 CTCTGAGGCTTGGTGGTGCCCTCCGGCGTCGGCGCCGCATTGTTGGTGAAACCGGTTTCC 33999 || |||||||| ||| |||| | ||| || ||||||||||| || |||||| Sbjct 16183 GACTTGGGCTTGGTCTGGCCTTCCGTCACCGGGCGAGCGTTGTTGGTGAAGCCCGTTTCC 16242 Query 34000 TGGACAAACTCGATGGAGTTTGAGGAGGTCACGCCCTGGGACAGGAGCGCGCGGATGGTC 34059 | ||| | || | | | || | |||| ||| | | || | ||||||||||| Sbjct 16243 TTGACGTATTCAACATTGCTCGACGCGGTCTGACCCGGCGCGAGCAAGTCGCGGATGGTC 16302 Query 34060 AGCGTGCGGTCAGGCGGCGTGATGATGCCCGGGACACG 34097 | | |||| | || |||||||| ||||| || || || Sbjct 16303 AACTTGCGCTGCGGAGGCGTGATAATGCCAGGAACGCG 16340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124634581387062