Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq998 111 2e-19 >seq998 Length=1052685 Score = 111 bits (122), Expect = 2e-19 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || || | |||||| || || || || || || | ||| || || || || ||||| Sbjct 140103 AACGGCGCGAGATGCTTCTTCACGCCGATGGGCCCCATGCCGGGGCCGCCGCCGCCATGC 140162 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||| ||||| ||||| || | || ||||| | || || || || || || | || Sbjct 140163 GGAATGCAGAAGGTCTTGTGCAGGTTGAGATGGCTCACGTCGGCGCCGTAATCGCCGGGG 140222 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 || || || ||||| || || || || || ||||||||||| ||||| || |||| | Sbjct 140223 CGGGCGAGGCCGACCTGGGCGTTGAGGTTGGCGCCATCGAGATAGACCTGCCCGCCATGG 140282 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 |||| ||||| | || |||| | ||| | || || || ||||| ||||| ||| Sbjct 140283 GCATGGACGATATCGCAGATCTCGCGGATCGCTTCCTCGAACACGCCATGCGTCGAGGGA 140342 Query 138402 TATGTAATCATAAT 138415 ||||| ||||| || Sbjct 140343 TATGTGATCATGAT 140356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578987551017480