Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020848.1
Length=76705
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 91.5 7e-14
seq1007 91.5 7e-14
>seq1008
Length=53843
Score = 91.5 bits (100), Expect = 7e-14
Identities = 353/549 (64%), Gaps = 18/549 (3%)
Strand=Plus/Minus
Query 42590 GAGCAACAGATTTGATTAGAGCTAGACGCTCTGGACGAAGAATCATTGAGCCGTAGTACC 42649
||||||| | ||||| ||| | | || || ||||| ||| ||||||||||||
Sbjct 22058 GAGCAACGGTCTTGATGAGACCCTGGCGTTCCGGACGCTTGTTCAGGAAGCCGTAGTACC 21999
Query 42650 ATTTAATGCTCATGAAGCCTGTTTCGCCGTATGGGTCGTGCTTATCGGCAGTCTCTTTAC 42709
| || ||| | |||||| ||||| ||||| || |||| || || || || || |
Sbjct 21998 ACTTGATGGACGAGAAGCCGGTTTCACCGTAAGGATCGTTACGGTCTGCGGTTTCGTTGC 21939
Query 42710 CCGGCTTCTTG-TGAGTGATCTTGAACTTCACGCCGTTACCGTCAGTTTGGAAACCGATA 42768
||||| ||||| |||| ||| || | |||||| || || || || |||||||||||
Sbjct 21938 CCGGCATCTTGGTGAG-GATGTTCATCTTCACCGACTTGCCATCGGTCTGGAAACCGATC 21880
Query 42769 GTAGTGAAGGCACCTTGACCAATTACTAGAAGTGGGAATACGTCGTA-CGAAC--CACCA 42825
|| | ||| | | ||| || | ||||| ||||| || || | | |||
Sbjct 21879 GTGGACCAGGAGTCGTCACCCGAGACGTACATCGGGAAGACGTCATAGCGTTCGTCGCCA 21820
Query 42826 ---------GTCTCACGGTAACCCGGGTTAGTACCAACAGCTGCACCAGCACCTGCCCAA 42876
||| ||| |||| || || || ||||| ||||||| |||||||||||
Sbjct 21819 TTGACCGTGGTCGAGCGGAAACCAGGATTGGTTCCAACCACTGCACCGACACCTGCCCAA 21760
Query 42877 TGTTGCATCTCTTGCGCTACAACGATACGGAAGTGATCGATAGAACCAACTTCACCTTTC 42936
|| |||| || | | | ||| ||||| ||| || | || | ||| || ||
Sbjct 21759 TGAAGCATTTCCGGAACCTGGATGATGCGGAAAGCATCAATGGTGCCGATTTCGCCATTG 21700
Query 42937 ATTAGAGTACCTGCAGCAGCGTAGTGCTTAGCTTC--AACGAACGCACGTTCACCGAAGT 42994
| | || || || || |||| |||| | || || ||| || | | |||||
Sbjct 21699 AGGATCGTGCCAGCGTCACCGTACTGCT--GGATCGGAATGAATGCCTGATTGCCGAACA 21642
Query 42995 AGTCAGTCATACGCTTAAGAGTAGGTAGCATTTCAGAACCTACGAACATTACGTAGCCAC 43054
|| |||| | ||| || ||| | || |||||| || || |||| | | | ||
Sbjct 21641 GATCCTTCATGCCCTTGAGCAGAGGAACCAGTTCAGAGCCGACATACATGATGCGGGCAG 21582
Query 43055 CATCGATTACTTTAGTATCGATCATACGAGAACCAGAGATGATCTTCGTTTGACGTGGAG 43114
|| | || |||||||||| ||| || || | ||||| ||| || || || |
Sbjct 21581 CAGGCAGCGTCTTGGTATCGATCAGACGCGAGCCGGTGATGACCTTGGTATGCTTCGGGG 21522
Query 43115 TACGGTTGT 43123
|||||||||
Sbjct 21521 TACGGTTGT 21513
>seq1007
Length=53843
Score = 91.5 bits (100), Expect = 7e-14
Identities = 353/549 (64%), Gaps = 18/549 (3%)
Strand=Plus/Minus
Query 42590 GAGCAACAGATTTGATTAGAGCTAGACGCTCTGGACGAAGAATCATTGAGCCGTAGTACC 42649
||||||| | ||||| ||| | | || || ||||| ||| ||||||||||||
Sbjct 22058 GAGCAACGGTCTTGATGAGACCCTGGCGTTCCGGACGCTTGTTCAGGAAGCCGTAGTACC 21999
Query 42650 ATTTAATGCTCATGAAGCCTGTTTCGCCGTATGGGTCGTGCTTATCGGCAGTCTCTTTAC 42709
| || ||| | |||||| ||||| ||||| || |||| || || || || || |
Sbjct 21998 ACTTGATGGACGAGAAGCCGGTTTCACCGTAAGGATCGTTACGGTCTGCGGTTTCGTTGC 21939
Query 42710 CCGGCTTCTTG-TGAGTGATCTTGAACTTCACGCCGTTACCGTCAGTTTGGAAACCGATA 42768
||||| ||||| |||| ||| || | |||||| || || || || |||||||||||
Sbjct 21938 CCGGCATCTTGGTGAG-GATGTTCATCTTCACCGACTTGCCATCGGTCTGGAAACCGATC 21880
Query 42769 GTAGTGAAGGCACCTTGACCAATTACTAGAAGTGGGAATACGTCGTA-CGAAC--CACCA 42825
|| | ||| | | ||| || | ||||| ||||| || || | | |||
Sbjct 21879 GTGGACCAGGAGTCGTCACCCGAGACGTACATCGGGAAGACGTCATAGCGTTCGTCGCCA 21820
Query 42826 ---------GTCTCACGGTAACCCGGGTTAGTACCAACAGCTGCACCAGCACCTGCCCAA 42876
||| ||| |||| || || || ||||| ||||||| |||||||||||
Sbjct 21819 TTGACCGTGGTCGAGCGGAAACCAGGATTGGTTCCAACCACTGCACCGACACCTGCCCAA 21760
Query 42877 TGTTGCATCTCTTGCGCTACAACGATACGGAAGTGATCGATAGAACCAACTTCACCTTTC 42936
|| |||| || | | | ||| ||||| ||| || | || | ||| || ||
Sbjct 21759 TGAAGCATTTCCGGAACCTGGATGATGCGGAAAGCATCAATGGTGCCGATTTCGCCATTG 21700
Query 42937 ATTAGAGTACCTGCAGCAGCGTAGTGCTTAGCTTC--AACGAACGCACGTTCACCGAAGT 42994
| | || || || || |||| |||| | || || ||| || | | |||||
Sbjct 21699 AGGATCGTGCCAGCGTCACCGTACTGCT--GGATCGGAATGAATGCCTGATTGCCGAACA 21642
Query 42995 AGTCAGTCATACGCTTAAGAGTAGGTAGCATTTCAGAACCTACGAACATTACGTAGCCAC 43054
|| |||| | ||| || ||| | || |||||| || || |||| | | | ||
Sbjct 21641 GATCCTTCATGCCCTTGAGCAGAGGAACCAGTTCAGAGCCGACATACATGATGCGGGCAG 21582
Query 43055 CATCGATTACTTTAGTATCGATCATACGAGAACCAGAGATGATCTTCGTTTGACGTGGAG 43114
|| | || |||||||||| ||| || || | ||||| ||| || || || |
Sbjct 21581 CAGGCAGCGTCTTGGTATCGATCAGACGCGAGCCGGTGATGACCTTGGTATGCTTCGGGG 21522
Query 43115 TACGGTTGT 43123
|||||||||
Sbjct 21521 TACGGTTGT 21513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 245326718028974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |