Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq890 91.5 2e-13
seq1300 87.8 2e-12
seq966 87.8 2e-12
>seq890
Length=125401
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/82 (87%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 53484 GCGGAGAGGGTGAGATTCGAACTCACGGA-GGCTTTCACC-TCGCTGGTTTTCAAGACCA 53541
||||| |||| ||||||||| |||||| |||| ||||| |||||||||||||||||||
Sbjct 24467 GCGGAAGCGGTGGGATTCGAACCCACGGACGGCTCTCACCGTCGCTGGTTTTCAAGACCA 24526
Query 53542 GAGCCATAAACCACTCGACCAC 53563
| ||| ||||||||||| ||||
Sbjct 24527 GTGCCTTAAACCACTCGGCCAC 24548
>seq1300
Length=673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 53750 ACGGACTCGAACCGTTGACATCCTACTTGCAAAGCAGGCGCTCTACCAACTGAGCTAATT 53809
||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 89 ACGGAGTCGAACCGACGACATCCTGCTTGCAAAGCAGGCGCTCTACCAACTGAGCTATGG 148
Query 53810 CCCCA-ATCGGGGTG 53823
||||| || |||||
Sbjct 149 CCCCATCTCAGGGTG 163
>seq966
Length=90452
Score = 87.8 bits (96), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 53750 ACGGACTCGAACCGTTGACATCCTACTTGCAAAGCAGGCGCTCTACCAACTGAGCTAATT 53809
||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 90365 ACGGAGTCGAACCGACGACATCCTGCTTGCAAAGCAGGCGCTCTACCAACTGAGCTATGG 90306
Query 53810 CCCCAATC 53817
||||| ||
Sbjct 90305 CCCCATTC 90298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665481930298680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |