Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq1300 87.8 2e-12
seq966 87.8 2e-12
seq1494 86.0 7e-12
seq733 84.2 2e-11
>seq1300
Length=673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 18016 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGTCCG 18071
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 145 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGACTCCG 90
>seq966
Length=90452
Score = 87.8 bits (96), Expect = 2e-12
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 18016 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGTCCG 18071
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 90309 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGACTCCG 90364
>seq1494
Length=1074632
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 18126 CATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAA 18185
|||||||| |||||||||||| ||||| ||||||||||||||| |||||| ||||| |
Sbjct 181312 CATTCCTCGGTAGCTCAGCGGTAGAGCATTCGACTGTTAATCGAATGGTCGCTGGTTCGA 181371
Query 18186 ATCCTACCTGGGGAG 18200
|||| || ||||||
Sbjct 181372 ATCCAGCCCGGGGAG 181386
>seq733
Length=265776
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 18008 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 18067
||||| ||||||||||||||||||||| ||| | ||| ||| || |||||||||||||
Sbjct 182023 CGGGGCTTTAGCTCAGTTGGTAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGAC 181964
Query 18068 TCCGCTATTCTCCA 18081
||||||| |||||
Sbjct 181963 TCCGCTAAGCTCCA 181950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561237483615600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |