Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq422 118 1e-21
seq79 109 7e-19
>seq422
Length=7389
Score = 118 bits (130), Expect = 1e-21
Identities = 196/281 (70%), Gaps = 3/281 (1%)
Strand=Plus/Plus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|||||| | ||||| ||||||||||| | || |||||| | || || || | ||
Sbjct 4964 GCAGTTATTACTGTTCCTGCTTACTTTAACAATGAACAACGTGAAGCTACTAAAAATGCA 5023
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| |||||| || |||| |||||||| || |||||||| || ||||| ||
Sbjct 5024 GGAATTATTGCAGGATTAAAAGTAGAAAGAATTATTAACGAACCAACTGCTGCTGCCATC 5083
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
||||||||| | |||| ||||| || ||||| | || | || | ||||| | |||
Sbjct 5084 GCTTATGGTTTAGACA--AACAA-GATAAAGATCACAAAATTTTAGTATTTGACTTAGGT 5140
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
||||| || ||||| || ||| |||| | | | |||||| | ||| |||||| |
Sbjct 5141 GGTGGAACATTTGACGTTTCAGTTCTAGAATTAGCAGGTGGAACATTTGAAGTATTATCA 5200
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGC 195990
||| |||||||| | || |||||||| || || |||||
Sbjct 5201 ACTAGTGGTGATAACAAACTTGGTGGTGACGACTTTGATGC 5241
Score = 95.1 bits (104), Expect = 2e-14
Identities = 190/282 (67%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 196463 CTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAA 196522
||| | ||||| | || |||| | ||| ||||||| || || || ||||| |
Sbjct 5711 CTATTAGATGTAACTCCTTTATCATTAGGTATTGAAACTTTAGGAGGAGTAATGACGCCA 5770
Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582
| || | | || || ||| |||| ||||| ||| |||||| |||||||| |
Sbjct 5771 TTAATCTCTCGTAATACTACTGTTCCTACTAAAAAGTCACAAGTTTTTTCAACTGCTGAA 5830
Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642
|| |||||||| | |||| ||||| || | |||||||||| | | || || |||
Sbjct 5831 GACAATCAACCCGCTGTTGATATTAGTGTTTTACAAGGAGAACGTCCACTAGCTAAAGAT 5890
Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702
|| ||| ||| || |||| | || | || || | | ||||| ||||||||||||
Sbjct 5891 AATCATTCACTGGGTCGTTTCCAATTAAGTGGTATCGAACCAGCACCAAGAGGTGTTCCA 5950
Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTA 196744
|| ||| | ||| || ||||| || | ||||| ||| ||
Sbjct 5951 CAAATTGAAGTTACTTTTGATATCGATGTTAATGGTATTGTA 5992
>seq79
Length=12267
Score = 109 bits (120), Expect = 7e-19
Identities = 334/504 (66%), Gaps = 18/504 (4%)
Strand=Plus/Minus
Query 198456 GATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAA 198515
||||||| || || || ||| || || ||| | | || ||||||||||||||||||
Sbjct 2159 GATGTTGCTGGGATTGATGAAGCAAAAGAAGAGTTGGTTGAAATTGTTGATTTTCTTAAA 2100
Query 198516 -AACCCCGAAAAGTACTA-TGGAAGTGGTGCCCGAATCCCACGTGG-TGCTCTTCTCGCC 198572
|| | |||| | | | || || ||| || ||| || ||| ||| |
Sbjct 2099 CAAAGGCAAAAATTTCAAGTGTTAG--GTGGGAAGATACCAAAAGGATGC-CTTTTAATT 2043
Query 198573 GGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTC 198632
||| |||| || ||||||||||| || || |||||||| || || |||||| | | |||
Sbjct 2042 GGTTCCCCTGGAACTGGTAAAACTCTACTTGCTCGTGCAATTGCAGGTGAAGCTAATGTA 1983
Query 198633 CCCTTTCTTCAGTGCTCCGCGGCGAG-TTTCATCGAGATGTTCGTTGGTGTTGGTGCTAA 198691
|| ||| || ||| | | | | |||| | || ||||| || ||||||||||| |
Sbjct 1982 CCGTTTTTT-AGTATTTCTGGATCTGATTTCGTTGAAATGTTTGTCGGTGTTGGTGCAAG 1924
Query 198692 GCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGA 198751
|| |||||||| | ||||| |||| ||||| || ||||| || ||||| ||
Sbjct 1923 CCGTGTCCGGGATATGTTTGATCAAGGTAAGAAAAATGCTCCTTGTATAATTTTCATAGA 1864
Query 198752 TGAGATTGACGCTGTTGGTAAGAAGCGTGG--TGGAACTACTACACCTGGTAATGATGAG 198809
|| || || || || |||| | | || || | | || | ||||| || ||
Sbjct 1863 CGAAATAGATGCAGTAGGTAGGCATCGCGGCATCGGTCT--TGGTGGCGGTAACGACGAA 1806
Query 198810 CGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACT 198866
| || || || | |||||| | || ||||||||||||||| || |||||
Sbjct 1805 AGGGAACAAACATTAAACCAGTTACTGGTTGAGATGGATGGTTTCGAGTCTAATGA---A 1749
Query 198867 GGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGT 198926
||| | | | |||||||| || || | || |||||||| ||||| ||| |
Sbjct 1748 GGTGTGATAATAATTGCTGCAACTAACCGTCCAGACGTCCTAGATCCAGCACTACTTAGA 1689
Query 198927 CCCGGTCGATTCGACCGTAAGATT 198950
|| ||||| || ||||| |||||
Sbjct 1688 CCTGGTCGTTTTGACCGACAGATT 1665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657850073303280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |