Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq422 118 1e-21 seq79 109 7e-19 >seq422 Length=7389 Score = 118 bits (130), Expect = 1e-21 Identities = 196/281 (70%), Gaps = 3/281 (1%) Strand=Plus/Plus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 |||||| | ||||| ||||||||||| | || |||||| | || || || | || Sbjct 4964 GCAGTTATTACTGTTCCTGCTTACTTTAACAATGAACAACGTGAAGCTACTAAAAATGCA 5023 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | |||||| || |||| |||||||| || |||||||| || ||||| || Sbjct 5024 GGAATTATTGCAGGATTAAAAGTAGAAAGAATTATTAACGAACCAACTGCTGCTGCCATC 5083 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 ||||||||| | |||| ||||| || ||||| | || | || | ||||| | ||| Sbjct 5084 GCTTATGGTTTAGACA--AACAA-GATAAAGATCACAAAATTTTAGTATTTGACTTAGGT 5140 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 ||||| || ||||| || ||| |||| | | | |||||| | ||| |||||| | Sbjct 5141 GGTGGAACATTTGACGTTTCAGTTCTAGAATTAGCAGGTGGAACATTTGAAGTATTATCA 5200 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGC 195990 ||| |||||||| | || |||||||| || || ||||| Sbjct 5201 ACTAGTGGTGATAACAAACTTGGTGGTGACGACTTTGATGC 5241 Score = 95.1 bits (104), Expect = 2e-14 Identities = 190/282 (67%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 196463 CTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAA 196522 ||| | ||||| | || |||| | ||| ||||||| || || || ||||| | Sbjct 5711 CTATTAGATGTAACTCCTTTATCATTAGGTATTGAAACTTTAGGAGGAGTAATGACGCCA 5770 Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582 | || | | || || ||| |||| ||||| ||| |||||| |||||||| | Sbjct 5771 TTAATCTCTCGTAATACTACTGTTCCTACTAAAAAGTCACAAGTTTTTTCAACTGCTGAA 5830 Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642 || |||||||| | |||| ||||| || | |||||||||| | | || || ||| Sbjct 5831 GACAATCAACCCGCTGTTGATATTAGTGTTTTACAAGGAGAACGTCCACTAGCTAAAGAT 5890 Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702 || ||| ||| || |||| | || | || || | | ||||| |||||||||||| Sbjct 5891 AATCATTCACTGGGTCGTTTCCAATTAAGTGGTATCGAACCAGCACCAAGAGGTGTTCCA 5950 Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTA 196744 || ||| | ||| || ||||| || | ||||| ||| || Sbjct 5951 CAAATTGAAGTTACTTTTGATATCGATGTTAATGGTATTGTA 5992 >seq79 Length=12267 Score = 109 bits (120), Expect = 7e-19 Identities = 334/504 (66%), Gaps = 18/504 (4%) Strand=Plus/Minus Query 198456 GATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAA 198515 ||||||| || || || ||| || || ||| | | || |||||||||||||||||| Sbjct 2159 GATGTTGCTGGGATTGATGAAGCAAAAGAAGAGTTGGTTGAAATTGTTGATTTTCTTAAA 2100 Query 198516 -AACCCCGAAAAGTACTA-TGGAAGTGGTGCCCGAATCCCACGTGG-TGCTCTTCTCGCC 198572 || | |||| | | | || || ||| || ||| || ||| ||| | Sbjct 2099 CAAAGGCAAAAATTTCAAGTGTTAG--GTGGGAAGATACCAAAAGGATGC-CTTTTAATT 2043 Query 198573 GGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTC 198632 ||| |||| || ||||||||||| || || |||||||| || || |||||| | | ||| Sbjct 2042 GGTTCCCCTGGAACTGGTAAAACTCTACTTGCTCGTGCAATTGCAGGTGAAGCTAATGTA 1983 Query 198633 CCCTTTCTTCAGTGCTCCGCGGCGAG-TTTCATCGAGATGTTCGTTGGTGTTGGTGCTAA 198691 || ||| || ||| | | | | |||| | || ||||| || ||||||||||| | Sbjct 1982 CCGTTTTTT-AGTATTTCTGGATCTGATTTCGTTGAAATGTTTGTCGGTGTTGGTGCAAG 1924 Query 198692 GCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGA 198751 || |||||||| | ||||| |||| ||||| || ||||| || ||||| || Sbjct 1923 CCGTGTCCGGGATATGTTTGATCAAGGTAAGAAAAATGCTCCTTGTATAATTTTCATAGA 1864 Query 198752 TGAGATTGACGCTGTTGGTAAGAAGCGTGG--TGGAACTACTACACCTGGTAATGATGAG 198809 || || || || || |||| | | || || | | || | ||||| || || Sbjct 1863 CGAAATAGATGCAGTAGGTAGGCATCGCGGCATCGGTCT--TGGTGGCGGTAACGACGAA 1806 Query 198810 CGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACT 198866 | || || || | |||||| | || ||||||||||||||| || ||||| Sbjct 1805 AGGGAACAAACATTAAACCAGTTACTGGTTGAGATGGATGGTTTCGAGTCTAATGA---A 1749 Query 198867 GGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGT 198926 ||| | | | |||||||| || || | || |||||||| ||||| ||| | Sbjct 1748 GGTGTGATAATAATTGCTGCAACTAACCGTCCAGACGTCCTAGATCCAGCACTACTTAGA 1689 Query 198927 CCCGGTCGATTCGACCGTAAGATT 198950 || ||||| || ||||| ||||| Sbjct 1688 CCTGGTCGTTTTGACCGACAGATT 1665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657850073303280