Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_020868.1 Length=76718 Score E Sequences producing significant alignments: (Bits) Value seq1008 91.5 7e-14 seq1007 91.5 7e-14 >seq1008 Length=53843 Score = 91.5 bits (100), Expect = 7e-14 Identities = 353/549 (64%), Gaps = 18/549 (3%) Strand=Plus/Plus Query 40303 ACAACCGTACTCCACGTCAAACGAAGATCATCTCTGGTTCTCGTATGATCGATACTAAAG 40362 |||||||||| || || || ||| ||||| | || || ||| |||||||||| || Sbjct 21513 ACAACCGTACCCCGAAGCATACCAAGGTCATCACCGGCTCGCGTCTGATCGATACCAAGA 21572 Query 40363 TAATCGATGGTGGCTACGTAATGTTCGTAGGTTCTGAAATGCTACCTACTCTTAAGCGTA 40422 | || || | | | |||| || || |||||| || | ||| || ||| | | Sbjct 21573 CGCTGCCTGCTGCCCGCATCATGTATGTCGGCTCTGAACTGGTTCCTCTGCTCAAGGGCA 21632 Query 40423 TGACTGACTACTTCGGTGAACGTGCGTTCGTT--GAAGCTAAGCACTACGCTGCTGCAGG 40480 ||| || ||||| | | || ||| || || | |||| |||| || || || Sbjct 21633 TGAAGGATCTGTTCGGCAATCAGGCATTCATTCCGATCC--AGCAGTACGGTGACGCTGG 21690 Query 40481 TACTCTAATGAAAGGTGAAGTTGGTTCTATCGATCACTTCCGTATCGTTGTAGCGCAAGA 40540 || | | || || ||| | || | || ||| ||||| ||| | | | || Sbjct 21691 CACGATCCTCAATGGCGAAATCGGCACCATTGATGCTTTCCGCATCATCCAGGTTCCGGA 21750 Query 40541 GATGCAACATTGGGCAGGTGCTGGTGCAGCTGTTGGTACTAACCCGGGTTACCGTGAGAC 40600 |||| ||||||||||||| ||||||| ||||| || || || |||| ||| ||| Sbjct 21751 AATGCTTCATTGGGCAGGTGTCGGTGCAGTGGTTGGAACCAATCCTGGTTTCCGCTCGAC 21810 Query 40601 ---------TGGTG--GTTCG-TACGACGTATTCCCACTTCTAGTAATTGGTCAAGGTGC 40648 ||| | | || || ||||| ||||| | || ||| | | | Sbjct 21811 CACGGTCAATGGCGACGAACGCTATGACGTCTTCCCGATGTACGTCTCGGGTGACGACTC 21870 Query 40649 CTTCACTACTATCGGTTTCCAAACTGACGGTAACGGCGTGAAGTTCAAGATCACTCA-CA 40707 || | || ||||||||||| || || || || |||||| | || ||| |||| || Sbjct 21871 CTGGTCCACGATCGGTTTCCAGACCGATGGCAAGTCGGTGAAGATGAACATC-CTCACCA 21929 Query 40708 AGAAGCCGGGTAAAGAGACTGCCGATAAGCACGACCCATACGGCGAAACAGGCTTCATGA 40767 ||| |||||| || || || || || |||| || ||||| ||||| |||||| | Sbjct 21930 AGATGCCGGGCAACGAAACCGCAGACCGTAACGATCCTTACGGTGAAACCGGCTTCTCGT 21989 Query 40768 GCATTAAATGGTACTACGGCTCAATGATTCTTCGTCCAGAGCGTCTAGCTCTAATCAAAT 40827 ||| || ||||||||||||| ||| ||||| || || | | ||| ||||| Sbjct 21990 CCATCAAGTGGTACTACGGCTTCCTGAACAAGCGTCCGGAACGCCAGGGTCTCATCAAGA 22049 Query 40828 CTGTTGCTC 40836 | ||||||| Sbjct 22050 CCGTTGCTC 22058 >seq1007 Length=53843 Score = 91.5 bits (100), Expect = 7e-14 Identities = 353/549 (64%), Gaps = 18/549 (3%) Strand=Plus/Plus Query 40303 ACAACCGTACTCCACGTCAAACGAAGATCATCTCTGGTTCTCGTATGATCGATACTAAAG 40362 |||||||||| || || || ||| ||||| | || || ||| |||||||||| || Sbjct 21513 ACAACCGTACCCCGAAGCATACCAAGGTCATCACCGGCTCGCGTCTGATCGATACCAAGA 21572 Query 40363 TAATCGATGGTGGCTACGTAATGTTCGTAGGTTCTGAAATGCTACCTACTCTTAAGCGTA 40422 | || || | | | |||| || || |||||| || | ||| || ||| | | Sbjct 21573 CGCTGCCTGCTGCCCGCATCATGTATGTCGGCTCTGAACTGGTTCCTCTGCTCAAGGGCA 21632 Query 40423 TGACTGACTACTTCGGTGAACGTGCGTTCGTT--GAAGCTAAGCACTACGCTGCTGCAGG 40480 ||| || ||||| | | || ||| || || | |||| |||| || || || Sbjct 21633 TGAAGGATCTGTTCGGCAATCAGGCATTCATTCCGATCC--AGCAGTACGGTGACGCTGG 21690 Query 40481 TACTCTAATGAAAGGTGAAGTTGGTTCTATCGATCACTTCCGTATCGTTGTAGCGCAAGA 40540 || | | || || ||| | || | || ||| ||||| ||| | | | || Sbjct 21691 CACGATCCTCAATGGCGAAATCGGCACCATTGATGCTTTCCGCATCATCCAGGTTCCGGA 21750 Query 40541 GATGCAACATTGGGCAGGTGCTGGTGCAGCTGTTGGTACTAACCCGGGTTACCGTGAGAC 40600 |||| ||||||||||||| ||||||| ||||| || || || |||| ||| ||| Sbjct 21751 AATGCTTCATTGGGCAGGTGTCGGTGCAGTGGTTGGAACCAATCCTGGTTTCCGCTCGAC 21810 Query 40601 ---------TGGTG--GTTCG-TACGACGTATTCCCACTTCTAGTAATTGGTCAAGGTGC 40648 ||| | | || || ||||| ||||| | || ||| | | | Sbjct 21811 CACGGTCAATGGCGACGAACGCTATGACGTCTTCCCGATGTACGTCTCGGGTGACGACTC 21870 Query 40649 CTTCACTACTATCGGTTTCCAAACTGACGGTAACGGCGTGAAGTTCAAGATCACTCA-CA 40707 || | || ||||||||||| || || || || |||||| | || ||| |||| || Sbjct 21871 CTGGTCCACGATCGGTTTCCAGACCGATGGCAAGTCGGTGAAGATGAACATC-CTCACCA 21929 Query 40708 AGAAGCCGGGTAAAGAGACTGCCGATAAGCACGACCCATACGGCGAAACAGGCTTCATGA 40767 ||| |||||| || || || || || |||| || ||||| ||||| |||||| | Sbjct 21930 AGATGCCGGGCAACGAAACCGCAGACCGTAACGATCCTTACGGTGAAACCGGCTTCTCGT 21989 Query 40768 GCATTAAATGGTACTACGGCTCAATGATTCTTCGTCCAGAGCGTCTAGCTCTAATCAAAT 40827 ||| || ||||||||||||| ||| ||||| || || | | ||| ||||| Sbjct 21990 CCATCAAGTGGTACTACGGCTTCCTGAACAAGCGTCCGGAACGCCAGGGTCTCATCAAGA 22049 Query 40828 CTGTTGCTC 40836 | ||||||| Sbjct 22050 CCGTTGCTC 22058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245368317268981