Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_020868.1
Length=76718
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 91.5 7e-14
seq1007 91.5 7e-14
>seq1008
Length=53843
Score = 91.5 bits (100), Expect = 7e-14
Identities = 353/549 (64%), Gaps = 18/549 (3%)
Strand=Plus/Plus
Query 40303 ACAACCGTACTCCACGTCAAACGAAGATCATCTCTGGTTCTCGTATGATCGATACTAAAG 40362
|||||||||| || || || ||| ||||| | || || ||| |||||||||| ||
Sbjct 21513 ACAACCGTACCCCGAAGCATACCAAGGTCATCACCGGCTCGCGTCTGATCGATACCAAGA 21572
Query 40363 TAATCGATGGTGGCTACGTAATGTTCGTAGGTTCTGAAATGCTACCTACTCTTAAGCGTA 40422
| || || | | | |||| || || |||||| || | ||| || ||| | |
Sbjct 21573 CGCTGCCTGCTGCCCGCATCATGTATGTCGGCTCTGAACTGGTTCCTCTGCTCAAGGGCA 21632
Query 40423 TGACTGACTACTTCGGTGAACGTGCGTTCGTT--GAAGCTAAGCACTACGCTGCTGCAGG 40480
||| || ||||| | | || ||| || || | |||| |||| || || ||
Sbjct 21633 TGAAGGATCTGTTCGGCAATCAGGCATTCATTCCGATCC--AGCAGTACGGTGACGCTGG 21690
Query 40481 TACTCTAATGAAAGGTGAAGTTGGTTCTATCGATCACTTCCGTATCGTTGTAGCGCAAGA 40540
|| | | || || ||| | || | || ||| ||||| ||| | | | ||
Sbjct 21691 CACGATCCTCAATGGCGAAATCGGCACCATTGATGCTTTCCGCATCATCCAGGTTCCGGA 21750
Query 40541 GATGCAACATTGGGCAGGTGCTGGTGCAGCTGTTGGTACTAACCCGGGTTACCGTGAGAC 40600
|||| ||||||||||||| ||||||| ||||| || || || |||| ||| |||
Sbjct 21751 AATGCTTCATTGGGCAGGTGTCGGTGCAGTGGTTGGAACCAATCCTGGTTTCCGCTCGAC 21810
Query 40601 ---------TGGTG--GTTCG-TACGACGTATTCCCACTTCTAGTAATTGGTCAAGGTGC 40648
||| | | || || ||||| ||||| | || ||| | | |
Sbjct 21811 CACGGTCAATGGCGACGAACGCTATGACGTCTTCCCGATGTACGTCTCGGGTGACGACTC 21870
Query 40649 CTTCACTACTATCGGTTTCCAAACTGACGGTAACGGCGTGAAGTTCAAGATCACTCA-CA 40707
|| | || ||||||||||| || || || || |||||| | || ||| |||| ||
Sbjct 21871 CTGGTCCACGATCGGTTTCCAGACCGATGGCAAGTCGGTGAAGATGAACATC-CTCACCA 21929
Query 40708 AGAAGCCGGGTAAAGAGACTGCCGATAAGCACGACCCATACGGCGAAACAGGCTTCATGA 40767
||| |||||| || || || || || |||| || ||||| ||||| |||||| |
Sbjct 21930 AGATGCCGGGCAACGAAACCGCAGACCGTAACGATCCTTACGGTGAAACCGGCTTCTCGT 21989
Query 40768 GCATTAAATGGTACTACGGCTCAATGATTCTTCGTCCAGAGCGTCTAGCTCTAATCAAAT 40827
||| || ||||||||||||| ||| ||||| || || | | ||| |||||
Sbjct 21990 CCATCAAGTGGTACTACGGCTTCCTGAACAAGCGTCCGGAACGCCAGGGTCTCATCAAGA 22049
Query 40828 CTGTTGCTC 40836
| |||||||
Sbjct 22050 CCGTTGCTC 22058
>seq1007
Length=53843
Score = 91.5 bits (100), Expect = 7e-14
Identities = 353/549 (64%), Gaps = 18/549 (3%)
Strand=Plus/Plus
Query 40303 ACAACCGTACTCCACGTCAAACGAAGATCATCTCTGGTTCTCGTATGATCGATACTAAAG 40362
|||||||||| || || || ||| ||||| | || || ||| |||||||||| ||
Sbjct 21513 ACAACCGTACCCCGAAGCATACCAAGGTCATCACCGGCTCGCGTCTGATCGATACCAAGA 21572
Query 40363 TAATCGATGGTGGCTACGTAATGTTCGTAGGTTCTGAAATGCTACCTACTCTTAAGCGTA 40422
| || || | | | |||| || || |||||| || | ||| || ||| | |
Sbjct 21573 CGCTGCCTGCTGCCCGCATCATGTATGTCGGCTCTGAACTGGTTCCTCTGCTCAAGGGCA 21632
Query 40423 TGACTGACTACTTCGGTGAACGTGCGTTCGTT--GAAGCTAAGCACTACGCTGCTGCAGG 40480
||| || ||||| | | || ||| || || | |||| |||| || || ||
Sbjct 21633 TGAAGGATCTGTTCGGCAATCAGGCATTCATTCCGATCC--AGCAGTACGGTGACGCTGG 21690
Query 40481 TACTCTAATGAAAGGTGAAGTTGGTTCTATCGATCACTTCCGTATCGTTGTAGCGCAAGA 40540
|| | | || || ||| | || | || ||| ||||| ||| | | | ||
Sbjct 21691 CACGATCCTCAATGGCGAAATCGGCACCATTGATGCTTTCCGCATCATCCAGGTTCCGGA 21750
Query 40541 GATGCAACATTGGGCAGGTGCTGGTGCAGCTGTTGGTACTAACCCGGGTTACCGTGAGAC 40600
|||| ||||||||||||| ||||||| ||||| || || || |||| ||| |||
Sbjct 21751 AATGCTTCATTGGGCAGGTGTCGGTGCAGTGGTTGGAACCAATCCTGGTTTCCGCTCGAC 21810
Query 40601 ---------TGGTG--GTTCG-TACGACGTATTCCCACTTCTAGTAATTGGTCAAGGTGC 40648
||| | | || || ||||| ||||| | || ||| | | |
Sbjct 21811 CACGGTCAATGGCGACGAACGCTATGACGTCTTCCCGATGTACGTCTCGGGTGACGACTC 21870
Query 40649 CTTCACTACTATCGGTTTCCAAACTGACGGTAACGGCGTGAAGTTCAAGATCACTCA-CA 40707
|| | || ||||||||||| || || || || |||||| | || ||| |||| ||
Sbjct 21871 CTGGTCCACGATCGGTTTCCAGACCGATGGCAAGTCGGTGAAGATGAACATC-CTCACCA 21929
Query 40708 AGAAGCCGGGTAAAGAGACTGCCGATAAGCACGACCCATACGGCGAAACAGGCTTCATGA 40767
||| |||||| || || || || || |||| || ||||| ||||| |||||| |
Sbjct 21930 AGATGCCGGGCAACGAAACCGCAGACCGTAACGATCCTTACGGTGAAACCGGCTTCTCGT 21989
Query 40768 GCATTAAATGGTACTACGGCTCAATGATTCTTCGTCCAGAGCGTCTAGCTCTAATCAAAT 40827
||| || ||||||||||||| ||| ||||| || || | | ||| |||||
Sbjct 21990 CCATCAAGTGGTACTACGGCTTCCTGAACAAGCGTCCGGAACGCCAGGGTCTCATCAAGA 22049
Query 40828 CTGTTGCTC 40836
| |||||||
Sbjct 22050 CCGTTGCTC 22058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 245368317268981
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |