Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021297.1 Length=52057 Score E Sequences producing significant alignments: (Bits) Value seq743 100 9e-17 >seq743 Length=263205 Score = 100 bits (110), Expect = 9e-17 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41007 GCCGCACCTCGCGCTCAGCGCCTGCGGCCTTGTCGATGGCTTTGGACACGTCGAGCGACT 41066 || ||||||| || || || || || || || || || | ||| ||| || |||||| Sbjct 30731 GCAGCACCTCACGTTCCGCACCCGCCGCTTTATCAATCCCCTTGCTCACATCATGCGACT 30790 Query 41067 TCGGGAACCCGCTGCCGTACAGCCACGCGATCGAGTCGCGGACCTCGAACCCGGCGTCCT 41126 |||| ||||| | || || | |||| || ||||||||||| || ||||| || || | Sbjct 30791 TCGGAAACCCCGTCCCATAAATCCACATGAGCGAGTCGCGGATTTCAAACCCCGCATCTT 30850 Query 41127 CGATCGCCGCCGCCAGCCGGTGCCAGGTGCGCGGGCCGCCGAAGGCGAGC-AGGTGCCCA 41185 ||||||| ||||| ||||| || ||||| ||||||| || ||| | |||||| Sbjct 30851 CGATCGCGCACGCCATGCGGTGATAGCCGCGCGATGCGCCGAACGC-AGCGACGTGCCCG 30909 Query 41186 CCGGGCTTGAGGACCCGTAGGCACTCGGA 41214 || || || || || || ||| ||||| Sbjct 30910 CCAGGTTTCAGCACGCGCAGGACTTCGGA 30938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166457836893722