Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq712 457 5e-124 seq1494 95.1 6e-15 seq752 95.1 6e-15 >seq712 Length=321952 Score = 457 bits (506), Expect = 5e-124 Identities = 660/918 (72%), Gaps = 20/918 (2%) Strand=Plus/Minus Query 59263 CGTGCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTG 59322 ||||| |||||||||||||| || || || || || ||||||||||||||||| || Sbjct 143971 CGTGCGATCAACTGGAACCGGATCGAAGATGAGAAAGACCTTGAGGTCTGGAACCGTCTG 143912 Query 59323 ACCAACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGC 59382 ||| ||| ||||||||||| || ||| | || | || ||||| || | | | |||| Sbjct 143911 ACCGGCAATTTCTGGCTGCCGGAAAAGGTGCCGCTTTCGAACGATATTCAGTCGTGGGAA 143852 Query 59383 ACGCTGA---CGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATG 59439 ||||||| || ||||| ||||| || ||||| || || |||||||| ||||| | Sbjct 143851 ACGCTGAAACCGCAGGAAAAGCAA---CTGACGATCCGCGTTTTCACCGGGCTGACACTT 143795 Query 59440 CTCGACACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCG 59499 ||||| ||||||||| | | || ||||| |||| ||||| ||| || |||||| Sbjct 143794 CTCGATACGATCCAGAACGCAGTCGGTGCCGTGAAGCTGATGGATGATGCAGCGACGCCG 143735 Query 59500 CACGAGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTAC 59559 || || || |||||| | |||||| | |||||||| |||| || || | || | Sbjct 143734 CATGAAGAAGCGGTGCTGTCCAACATCTCCTTCATGGAAGCGGTTCATGC-ACGATCCTA 143676 Query 59560 AGCAAC-ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTC 59618 | | || |||||||| ||||| | | ||| | |||| || | || ||||| Sbjct 143675 TTCGTCGATATTCTCGACTTTGTGCCTGACGCCGGATGTTGACGATGCCTATCGTTGGTC 143616 Query 59619 GGAGGAGAATCCGAA--CCTGCAACGCAAGGCTCAGATCG--TCCTGGACTACTACCAGG 59674 ||||| || |||| |||||| |||||| || | || |||||||| | || | | Sbjct 143615 CGAGGAAAA--CGAATTCCTGCAGCGCAAG--TCCGTTCTGATCCTGGACCAGTATCGCG 143560 Query 59675 GTGACGATCCGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACT 59734 || ||||||||||| |||| | ||| || |||||| | || |||||||| | Sbjct 143559 CGGATGATCCGCTGAAAAGGAAAATCGCCAGCGTTTTCCTGGAGAGCTTTCTGTTCTATT 143500 Query 59735 CGGGCTTCTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACA 59794 | |||||||| ||||| ||||||||||| || |||| |||||||| || || ||||| Sbjct 143499 CCGGCTTCTATCTGCCCATGTACTGGTCGAGCCGGGCAAAGCTGACCAATACAGCCGATC 143440 Query 59795 TGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCC 59854 | |||||||||||||| ||||| ||||| ||||| ||||| |||||||| ||||| |||| Sbjct 143439 TTATCCGGCTCATCATCCGTGATGAGGCTGTGCATGGCTATTACATCGGTTACAAATTCC 143380 Query 59855 AGCGCGGCCTGGAGACTC-AGAACGAGGCTC-GCCGCGAGGAGCTGAAGGACTACACGTA 59912 ||||||| ||||| || | |||||| | | | || ||| | ||||| | | | Sbjct 143379 AGCGCGGACTGGA-ACGCTTGAACGAAGAGCAGAAGC-AGGCAATCAAGGATTTTGCCTT 143322 Query 59913 CGGTCTGCTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGG 59972 || || || || || | |||||||| ||| || |||||| | | || || || || Sbjct 143321 CGAACTTCTTCTGGAACTTTACGACAATGAGGTTCGCTACACGGAAGCGCTATATGATGG 143262 Query 59973 CGTGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGAT 60032 ||| || || ||||| || ||||||| ||||||| ||||||||||||||||| || || Sbjct 143261 CGTTGGCCTAACTGAAGACGTCAAGAAATTCCTGCATTACAACGCCAACAAGGCTCTCAT 143202 Query 60033 GAATCTCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTT 60092 ||| |||||||| ||||| || |||||| || | | |||| || |||||||| | Sbjct 143201 GAACCTCGGCTATGAGGCACTCTTCCCGGCTGAAGCGTGCAAGGTCAACCCGGCGATCCT 143142 Query 60093 GGCGGCACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCAC 60152 | | || || || || | ||||| ||||||||||| ||||| || || ||| | Sbjct 143141 GTCCGCTCTTTCGCCGAATGCAGACGAAAACCACGACTTTTTCTCCGGTTCCGGCTCTTC 143082 Query 60153 GTATGTGATTGGCAAGGC 60170 || || || |||||||| Sbjct 143081 TTACGTCATCGGCAAGGC 143064 >seq1494 Length=1074632 Score = 95.1 bits (104), Expect = 6e-15 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 48005 ATCATTCCGCGCAACCGGTTCTTCAACATCTACCTGCACCAGTTCCTGTCCAGCGATGAC 48064 ||||| ||||||||||||||||||||||||||| ||||||| |||||| | || ||| Sbjct 598389 ATCATCCCGCGCAACCGGTTCTTCAACATCTACTTGCACCACTTCCTGCGCTCGGACGAC 598330 Query 48065 GACAGGGCCCTGCATGATCACCCGTGGTGG 48094 ||| |||| |||| ||||| || |||||| Sbjct 598329 GACCGGGCGTTGCACGATCATCCTTGGTGG 598300 >seq752 Length=262051 Score = 95.1 bits (104), Expect = 6e-15 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 61694 TGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGCAAGGGATCTG 61753 ||||||||||| | || | ||| | ||||| || | |||| ||||| ||| | Sbjct 251558 TGCCGTTCATCCATAAACATGTCGCGGTCATGCCCGACGTGCACTGGGGCATGGGGGCGA 251617 Query 61754 CGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGGACA 61813 |||| || |||| ||||| ||| ||| || ||||||| ||||| || || ||||||| Sbjct 251618 CGGTGGGTTCCGTGATCCCGACCGTGGGGGCGATCATTCCCGCCGCCGTGGGCGTGGACA 251677 Query 61814 TCGGCTGCGGCATGATTGCCGT 61835 |||||||||||||||| || || Sbjct 251678 TCGGCTGCGGCATGATGGCGGT 251699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258926469569724