Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_021299.1
Length=80955
Score E
Sequences producing significant alignments: (Bits) Value
seq712 457 5e-124
seq1494 95.1 6e-15
seq752 95.1 6e-15
>seq712
Length=321952
Score = 457 bits (506), Expect = 5e-124
Identities = 660/918 (72%), Gaps = 20/918 (2%)
Strand=Plus/Minus
Query 59263 CGTGCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTG 59322
||||| |||||||||||||| || || || || || ||||||||||||||||| ||
Sbjct 143971 CGTGCGATCAACTGGAACCGGATCGAAGATGAGAAAGACCTTGAGGTCTGGAACCGTCTG 143912
Query 59323 ACCAACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGC 59382
||| ||| ||||||||||| || ||| | || | || ||||| || | | | ||||
Sbjct 143911 ACCGGCAATTTCTGGCTGCCGGAAAAGGTGCCGCTTTCGAACGATATTCAGTCGTGGGAA 143852
Query 59383 ACGCTGA---CGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATG 59439
||||||| || ||||| ||||| || ||||| || || |||||||| ||||| |
Sbjct 143851 ACGCTGAAACCGCAGGAAAAGCAA---CTGACGATCCGCGTTTTCACCGGGCTGACACTT 143795
Query 59440 CTCGACACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCG 59499
||||| ||||||||| | | || ||||| |||| ||||| ||| || ||||||
Sbjct 143794 CTCGATACGATCCAGAACGCAGTCGGTGCCGTGAAGCTGATGGATGATGCAGCGACGCCG 143735
Query 59500 CACGAGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTAC 59559
|| || || |||||| | |||||| | |||||||| |||| || || | || |
Sbjct 143734 CATGAAGAAGCGGTGCTGTCCAACATCTCCTTCATGGAAGCGGTTCATGC-ACGATCCTA 143676
Query 59560 AGCAAC-ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTC 59618
| | || |||||||| ||||| | | ||| | |||| || | || |||||
Sbjct 143675 TTCGTCGATATTCTCGACTTTGTGCCTGACGCCGGATGTTGACGATGCCTATCGTTGGTC 143616
Query 59619 GGAGGAGAATCCGAA--CCTGCAACGCAAGGCTCAGATCG--TCCTGGACTACTACCAGG 59674
||||| || |||| |||||| |||||| || | || |||||||| | || | |
Sbjct 143615 CGAGGAAAA--CGAATTCCTGCAGCGCAAG--TCCGTTCTGATCCTGGACCAGTATCGCG 143560
Query 59675 GTGACGATCCGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACT 59734
|| ||||||||||| |||| | ||| || |||||| | || |||||||| |
Sbjct 143559 CGGATGATCCGCTGAAAAGGAAAATCGCCAGCGTTTTCCTGGAGAGCTTTCTGTTCTATT 143500
Query 59735 CGGGCTTCTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACA 59794
| |||||||| ||||| ||||||||||| || |||| |||||||| || || |||||
Sbjct 143499 CCGGCTTCTATCTGCCCATGTACTGGTCGAGCCGGGCAAAGCTGACCAATACAGCCGATC 143440
Query 59795 TGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCC 59854
| |||||||||||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||
Sbjct 143439 TTATCCGGCTCATCATCCGTGATGAGGCTGTGCATGGCTATTACATCGGTTACAAATTCC 143380
Query 59855 AGCGCGGCCTGGAGACTC-AGAACGAGGCTC-GCCGCGAGGAGCTGAAGGACTACACGTA 59912
||||||| ||||| || | |||||| | | | || ||| | ||||| | | |
Sbjct 143379 AGCGCGGACTGGA-ACGCTTGAACGAAGAGCAGAAGC-AGGCAATCAAGGATTTTGCCTT 143322
Query 59913 CGGTCTGCTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGG 59972
|| || || || || | |||||||| ||| || |||||| | | || || || ||
Sbjct 143321 CGAACTTCTTCTGGAACTTTACGACAATGAGGTTCGCTACACGGAAGCGCTATATGATGG 143262
Query 59973 CGTGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGAT 60032
||| || || ||||| || ||||||| ||||||| ||||||||||||||||| || ||
Sbjct 143261 CGTTGGCCTAACTGAAGACGTCAAGAAATTCCTGCATTACAACGCCAACAAGGCTCTCAT 143202
Query 60033 GAATCTCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTT 60092
||| |||||||| ||||| || |||||| || | | |||| || |||||||| |
Sbjct 143201 GAACCTCGGCTATGAGGCACTCTTCCCGGCTGAAGCGTGCAAGGTCAACCCGGCGATCCT 143142
Query 60093 GGCGGCACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCAC 60152
| | || || || || | ||||| ||||||||||| ||||| || || ||| |
Sbjct 143141 GTCCGCTCTTTCGCCGAATGCAGACGAAAACCACGACTTTTTCTCCGGTTCCGGCTCTTC 143082
Query 60153 GTATGTGATTGGCAAGGC 60170
|| || || ||||||||
Sbjct 143081 TTACGTCATCGGCAAGGC 143064
>seq1494
Length=1074632
Score = 95.1 bits (104), Expect = 6e-15
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 48005 ATCATTCCGCGCAACCGGTTCTTCAACATCTACCTGCACCAGTTCCTGTCCAGCGATGAC 48064
||||| ||||||||||||||||||||||||||| ||||||| |||||| | || |||
Sbjct 598389 ATCATCCCGCGCAACCGGTTCTTCAACATCTACTTGCACCACTTCCTGCGCTCGGACGAC 598330
Query 48065 GACAGGGCCCTGCATGATCACCCGTGGTGG 48094
||| |||| |||| ||||| || ||||||
Sbjct 598329 GACCGGGCGTTGCACGATCATCCTTGGTGG 598300
>seq752
Length=262051
Score = 95.1 bits (104), Expect = 6e-15
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 61694 TGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGCAAGGGATCTG 61753
||||||||||| | || | ||| | ||||| || | |||| ||||| ||| |
Sbjct 251558 TGCCGTTCATCCATAAACATGTCGCGGTCATGCCCGACGTGCACTGGGGCATGGGGGCGA 251617
Query 61754 CGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGGACA 61813
|||| || |||| ||||| ||| ||| || ||||||| ||||| || || |||||||
Sbjct 251618 CGGTGGGTTCCGTGATCCCGACCGTGGGGGCGATCATTCCCGCCGCCGTGGGCGTGGACA 251677
Query 61814 TCGGCTGCGGCATGATTGCCGT 61835
|||||||||||||||| || ||
Sbjct 251678 TCGGCTGCGGCATGATGGCGGT 251699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 258926469569724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |