Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021302.1 Length=47109 Score E Sequences producing significant alignments: (Bits) Value seq743 113 1e-20 >seq743 Length=263205 Score = 113 bits (124), Expect = 1e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 38038 CTGCGTGTGTTGAAACCGGGCGGGCACATGTTGGCGTTCGGCGGTTCGCGCACCTGGCAC 38097 ||||| ||| ||||||| ||||||||| | |||||||||| |||||| || ||| Sbjct 30929 CTGCGCGTGCTGAAACCTGGCGGGCACGTCGCTGCGTTCGGCGCATCGCGCGGCTATCAC 30870 Query 38098 CGGCTGGCGGCGGCGATCGAGGACGCCGGGTTCGAGGTCCGCGACTCGATCGCCTGGCTG 38157 || ||||| |||||||| || || ||||| || ||||||||||| || ||| | Sbjct 30869 CGCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCATGTGGATT 30810 Query 38158 TACGGATCCGGGTTCCCGAAGTCGCTCGACGTATCGAAGGCCATCGACAAGGACGCTGGT 38217 || || | ||||| |||||||||| || || |||| || || || | || ||| Sbjct 30809 TATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAGCGGCGGGT 30750 Query 38218 GCTGAGCGTGAGGTG 38232 || || ||||||||| Sbjct 30749 GCGGAACGTGAGGTG 30735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150624518741698