Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq114 140 1e-27
>seq114
Length=11559
Score = 140 bits (154), Expect = 1e-27
Identities = 234/336 (70%), Gaps = 2/336 (1%)
Strand=Plus/Minus
Query 289023 TTTTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082
|||| | || || ||||||||||| ||||| ||||| | ||| |||| | ||| | | ||
Sbjct 8198 TTTTCTTCCTACTGCATCAATTTCATCAATAAAAATAATACAAGGAGCACTTTTTTTAGC 8139
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | | ||| | |||||| | | || ||||||| |||||| | | |||| |||||||
Sbjct 8138 AGTAGTAAACATTTCTCTAATTCTTGAAGCTCCAACTCCAACAAAAACTTCTTCAAATTC 8079
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
|||| | || | | || ||| | ||| |||||| || || ||||| | || | |
Sbjct 8078 AGAACCAGAAATTGAAAAGAAAGGAACACCTGCTTCACCAGCAACTGCTTTTGCTAATAA 8019
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261
|||||||| || ||||| ||||| | | |||||||| ||||| | | |||| ||||
Sbjct 8018 AGTCTTACCAGTACCAGGCGGTCCTACAAGAAGAACTCCTTTTGGCAGTCTTGCACCCAT 7959
Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321
| |||||| | || ||||||||| | |||| ||| || | ||| |||||
Sbjct 7958 TTG-TGCATATTTTTGTGGAAACTTTAAAAAATGAACAACTTCTTCTAATTCCAATTTTT 7900
Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGTAATAT 289357
| || | | || || ||||||| ||| || |||
Sbjct 7899 CTTCTTTAATACCAGCAACATCAGTAAATCTAGTAT 7864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471789332363163
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |