Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq114 140 1e-27 >seq114 Length=11559 Score = 140 bits (154), Expect = 1e-27 Identities = 234/336 (70%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 289023 TTTTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 |||| | || || ||||||||||| ||||| ||||| | ||| |||| | ||| | | || Sbjct 8198 TTTTCTTCCTACTGCATCAATTTCATCAATAAAAATAATACAAGGAGCACTTTTTTTAGC 8139 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | | | ||| | |||||| | | || ||||||| |||||| | | |||| ||||||| Sbjct 8138 AGTAGTAAACATTTCTCTAATTCTTGAAGCTCCAACTCCAACAAAAACTTCTTCAAATTC 8079 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 |||| | || | | || ||| | ||| |||||| || || ||||| | || | | Sbjct 8078 AGAACCAGAAATTGAAAAGAAAGGAACACCTGCTTCACCAGCAACTGCTTTTGCTAATAA 8019 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261 |||||||| || ||||| ||||| | | |||||||| ||||| | | |||| |||| Sbjct 8018 AGTCTTACCAGTACCAGGCGGTCCTACAAGAAGAACTCCTTTTGGCAGTCTTGCACCCAT 7959 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 | |||||| | || ||||||||| | |||| ||| || | ||| ||||| Sbjct 7958 TTG-TGCATATTTTTGTGGAAACTTTAAAAAATGAACAACTTCTTCTAATTCCAATTTTT 7900 Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGTAATAT 289357 | || | | || || ||||||| ||| || ||| Sbjct 7899 CTTCTTTAATACCAGCAACATCAGTAAATCTAGTAT 7864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471789332363163