Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq998 86.0 6e-12 >seq998 Length=1052685 Score = 86.0 bits (94), Expect = 6e-12 Identities = 178/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 105040 CCGGG-TACTTCAACGTCGTCGCCGACTACACCAAGTGGGCTAAGGACC---GCATGCTC 105095 ||||| |||||| |||| |||||| || ||||||||| |||| | |||| | Sbjct 531472 CCGGGCTACTTCCTGATCGTGTCCGACTTCATCAAGTGGGCGAAGGCGCAGGGCATTCCG 531531 Query 105096 GTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTCGTACCTGATGGACATCACC 105155 ||||| || || || || || | || |||||||| || | || | || ||||||| Sbjct 531532 GTCGGGCCGGGGCGCGGCTCCGGCGCGGGCTCGCTGGTGGCCTATGCGCTGACCATCACC 531591 Query 105156 GAGCTCGACCCGATCAAGTACGACCTGATGTTCGAGCGGTTCATCTCGCCGGAGCGGAAG 105215 || ||||| ||| | | || |||| ||||||| || || || || ||||| | Sbjct 531592 GACCTCGATCCGCTGCGCTTCGGCCTGCTGTTCGAACGCTTTCTCAATCCCGAGCGCGTG 531651 Query 105216 AACTTCCCCGACATCGATCTCGACTTCCCGCAGAAGCGTCGCGGCGAGGTCGTCGACTAC 105275 | || ||| |||| |||||||| ||| | || ||||||||||| || | ||| Sbjct 531652 TCGATGCCGGACTTCGACATCGACTTCTGTCAGGATCGCCGCGGCGAGGTGATCCATTAC 531711 Query 105276 ATCGCCGACCGCTACGGCCACGA 105298 | || ||||| |||| ||| Sbjct 531712 GTGCAGGAGCGCTATGGCCGCGA 531734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 456065054320920