Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq1482 161 1e-34 seq743 141 1e-28 seq890 116 5e-21 >seq1482 Length=483770 Score = 161 bits (178), Expect = 1e-34 Identities = 194/261 (74%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 98945 GAAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAA 99004 |||| | ||||| ||||| || || ||||| || | |||||||| |||| ||| ||| Sbjct 421428 GAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAA 421487 Query 99005 CTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCC 99063 ||| | ||| ||||||||| | ||||| ||| | | | ||| || || ||| Sbjct 421488 TTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAAGCTATC-CCTCAAATCGATCGTCC 421546 Query 99064 ATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTG 99123 |||| ||||| ||||| ||||| ||||||||||| ||| ||||||| || || | || | Sbjct 421547 ATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACGGCG 421606 Query 99124 TAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGC 99183 | | || ||||| || ||||||||| | || ||||| ||||||||||| || ||| || Sbjct 421607 TCTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTTCGC 421666 Query 99184 AGTGGCGGGCATGGACTGCGC 99204 ||||||| ||||| | |||| Sbjct 421667 AGTGGCGTTCATGGCCCGCGC 421687 >seq743 Length=263205 Score = 141 bits (156), Expect = 1e-28 Identities = 189/260 (73%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAA 99011 ||||| ||||| || || ||||| || | ||||| || |||||||| |||||| | Sbjct 73483 GACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAACCTCGCC 73424 Query 99012 GAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCCATGAACT 99070 | ||||| ||| || |||||||| | |||| | | ||| |||| ||||| Sbjct 73423 GCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGG-CGATTGTCCACGAACT 73365 Query 99071 GCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCAT 99130 ||||||||| || ||||||||||| | | || ||| | |||||||||| ||||| Sbjct 73364 GCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGTCACCAT 73305 Query 99131 TTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 |||||||| ||||||||| || || || || |||||||| ||||| ||||||||||| Sbjct 73304 CTGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAAGCAGTGGCG 73245 Query 99191 GGCATGGACTGCGCATGATG 99210 ||||| |||| |||| Sbjct 73244 CTCATGGCAGGCGCCGGATG 73225 Score = 127 bits (140), Expect = 3e-24 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 99591 TCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCG 99650 || || ||||||||||||||| ||||||||||| | || |||||||| ||||||||| Sbjct 73063 TCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATCGCG 73004 Query 99651 TCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATTTC 99710 || ||||| || |||| ||| | |||||| | || || | ||| |||||||||| Sbjct 73003 TCCTATGCGCTGCTGACGATGATGATCGCACAGGTGACGGATCTTGCGCCGGGCGATTTC 72944 Query 99711 GTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACG 99763 || || ||| || | |||||||||||| ||||||||||| ||||| || Sbjct 72943 ATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCG 72891 >seq890 Length=125401 Score = 116 bits (128), Expect = 5e-21 Identities = 182/255 (71%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCG-TTTCAACTTGCA 99010 ||||| ||||| || ||||| || ||||||| | |||||| || ||| | || || Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCC 47662 Query 99011 AGAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCCATGAAC 99069 | | || ||||| | | || |||||| | ||| ||||||| || || ||| |||| Sbjct 47661 A-AGGGCTTCCCCGTCCTGACCACCAAGAAGCTGC-ACCTGCGTTCGATCATCATCGAAC 47604 Query 99070 TGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCA 99129 |||||||||||||| ||||| ||||| ||| | || || || || || || || Sbjct 47603 TGCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCA 47544 Query 99130 TTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGC 99189 | ||||| |||||||| ||| | ||||| || || || || || || |||||||||| Sbjct 47543 TCTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGC 47484 Query 99190 GGGCATGGACTGCGC 99204 | | ||||| |||| Sbjct 47483 GCTCGTGGACGGCGC 47469 Score = 104 bits (114), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 99594 TGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCGTCG 99653 || ||||| ||||||||||| |||||| | ||| |||| |||||||| |||||||| || Sbjct 47298 TGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTCC 47239 Query 99654 TATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATTTCGTC 99713 || || || |||| | ||| | || ||| | | | ||| | |||||| |||||| Sbjct 47238 TACGCCCTGCTGACCCTGATGGTGGCCCAGGTCGTGGGTCTGGAGCCGGGCGAGTTCGTC 47179 Query 99714 TGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGC 99760 ||| ||| || | || |||||| ||||||||||||||||| Sbjct 47178 CATACCTTCGGCGACGCCCACCTGTATCTGAACCATCTGGAACAGGC 47132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716623372017960