Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq1482 161 1e-34
seq743 141 1e-28
seq890 116 5e-21
>seq1482
Length=483770
Score = 161 bits (178), Expect = 1e-34
Identities = 194/261 (74%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 98945 GAAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAA 99004
|||| | ||||| ||||| || || ||||| || | |||||||| |||| ||| |||
Sbjct 421428 GAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAA 421487
Query 99005 CTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCC 99063
||| | ||| ||||||||| | ||||| ||| | | | ||| || || |||
Sbjct 421488 TTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAAGCTATC-CCTCAAATCGATCGTCC 421546
Query 99064 ATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTG 99123
|||| ||||| ||||| ||||| ||||||||||| ||| ||||||| || || | || |
Sbjct 421547 ATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACGGCG 421606
Query 99124 TAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGC 99183
| | || ||||| || ||||||||| | || ||||| ||||||||||| || ||| ||
Sbjct 421607 TCTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTTCGC 421666
Query 99184 AGTGGCGGGCATGGACTGCGC 99204
||||||| ||||| | ||||
Sbjct 421667 AGTGGCGTTCATGGCCCGCGC 421687
>seq743
Length=263205
Score = 141 bits (156), Expect = 1e-28
Identities = 189/260 (73%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAA 99011
||||| ||||| || || ||||| || | ||||| || |||||||| |||||| |
Sbjct 73483 GACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAACCTCGCC 73424
Query 99012 GAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCCATGAACT 99070
| ||||| ||| || |||||||| | |||| | | ||| |||| |||||
Sbjct 73423 GCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGG-CGATTGTCCACGAACT 73365
Query 99071 GCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCAT 99130
||||||||| || ||||||||||| | | || ||| | |||||||||| |||||
Sbjct 73364 GCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGTCACCAT 73305
Query 99131 TTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190
|||||||| ||||||||| || || || || |||||||| ||||| |||||||||||
Sbjct 73304 CTGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAAGCAGTGGCG 73245
Query 99191 GGCATGGACTGCGCATGATG 99210
||||| |||| ||||
Sbjct 73244 CTCATGGCAGGCGCCGGATG 73225
Score = 127 bits (140), Expect = 3e-24
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 99591 TCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCG 99650
|| || ||||||||||||||| ||||||||||| | || |||||||| |||||||||
Sbjct 73063 TCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATCGCG 73004
Query 99651 TCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATTTC 99710
|| ||||| || |||| ||| | |||||| | || || | ||| ||||||||||
Sbjct 73003 TCCTATGCGCTGCTGACGATGATGATCGCACAGGTGACGGATCTTGCGCCGGGCGATTTC 72944
Query 99711 GTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACG 99763
|| || ||| || | |||||||||||| ||||||||||| ||||| ||
Sbjct 72943 ATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCG 72891
>seq890
Length=125401
Score = 116 bits (128), Expect = 5e-21
Identities = 182/255 (71%), Gaps = 4/255 (2%)
Strand=Plus/Minus
Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCG-TTTCAACTTGCA 99010
||||| ||||| || ||||| || ||||||| | |||||| || ||| | || ||
Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCC 47662
Query 99011 AGAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCCATGAAC 99069
| | || ||||| | | || |||||| | ||| ||||||| || || ||| ||||
Sbjct 47661 A-AGGGCTTCCCCGTCCTGACCACCAAGAAGCTGC-ACCTGCGTTCGATCATCATCGAAC 47604
Query 99070 TGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCA 99129
|||||||||||||| ||||| ||||| ||| | || || || || || || ||
Sbjct 47603 TGCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCA 47544
Query 99130 TTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGC 99189
| ||||| |||||||| ||| | ||||| || || || || || || ||||||||||
Sbjct 47543 TCTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGC 47484
Query 99190 GGGCATGGACTGCGC 99204
| | ||||| ||||
Sbjct 47483 GCTCGTGGACGGCGC 47469
Score = 104 bits (114), Expect = 3e-17
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 99594 TGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCGTCG 99653
|| ||||| ||||||||||| |||||| | ||| |||| |||||||| |||||||| ||
Sbjct 47298 TGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTCC 47239
Query 99654 TATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATTTCGTC 99713
|| || || |||| | ||| | || ||| | | | ||| | |||||| ||||||
Sbjct 47238 TACGCCCTGCTGACCCTGATGGTGGCCCAGGTCGTGGGTCTGGAGCCGGGCGAGTTCGTC 47179
Query 99714 TGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGC 99760
||| ||| || | || |||||| |||||||||||||||||
Sbjct 47178 CATACCTTCGGCGACGCCCACCTGTATCTGAACCATCTGGAACAGGC 47132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716623372017960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |