Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq1008 286 2e-72 seq1007 286 2e-72 >seq1008 Length=53843 Score = 286 bits (316), Expect = 2e-72 Identities = 800/1211 (66%), Gaps = 19/1211 (2%) Strand=Plus/Minus Query 59404 AGAAGCAAAATTGAACCAAATATTACGAGTCATCATCTCATTCTGGAGT-AGTGGAATGA 59462 |||||| || |||||||| || ||||| | ||||| | ||| || | | || ||| Sbjct 4870 AGAAGCGAAGTTGAACCAGATGTTACGGACCTGCATCTGCTCCTGCAGCCACTTGA-TGA 4812 Query 59463 AC-CCACCTTGTTGACCTGTAACTTCAATGCCTACAGATTGAGGTTGGTAC-TCTACAAC 59520 | ||| || | || || || ||||| | ||| || || || || | ||| ||| ||| Sbjct 4811 AGGCCAGCT-GCTGGCCGGTGACTTCGACGCCGACGGACTGCGGATTATACATCTG-AAC 4754 Query 59521 TAGTCTGAATAGGTCATCAAAGTTCTTATCCATTAACTGACGTCTACAAATACCATCAAC 59580 | | ||| || ||||| | ||| ||||| |||| || | ||||||||| Sbjct 4753 CAAACGGAACAGTTCATCGATCGACTTGTCCATCGTGGTACGTTCGCAGAAACCATCAAC 4694 Query 59581 CCAGAACCAATCTCCATTAGAGTTGATAGCCCATACAGAGATAACTGAATAGTCAGCAGA 59640 ||||||||| || ||||| |||| ||||| |||||||| || || |||| || | Sbjct 4693 CCAGAACCAGTCGCCATTCCAGTTATGTGCCCAGACAGAGATGACCGAGAAGTCGGCCGT 4634 Query 59641 CTGTTTTTCAGAAGTAGCAAAGTCAGTAGTGATATAGAAATTAAAATGACCTCGATTCAA 59700 |||||| || || || |||||||| || ||||||||||| || | | ||| ||| Sbjct 4633 CTGTTTGTCCGAGGTCGCAAAGTCGGTCGTGATATAGAAGTTGTAG-GCGCTC--TTCTG 4577 Query 59701 ---CAGAAGAGACTTACGCTTGTACCATTGGATATCAGAATCCATGACAAGTCTCTCTTC 59757 |||||| | |||||||| | ||| || | |||| ||| || | ||| || Sbjct 4576 GTTCAGAAGCAAAGCGCGCTTGTATTCCTTGATCTCCGCATCCTGGACCAGACGCTCCTC 4517 Query 59758 ATCGGAGGTAATTCGTAGCATCAATTCCTGATTGAAAGCAGCAACCTGTCCAGTTGATAC 59817 |||||||| || || ||||| | ||||| |||| | || |||| || || || Sbjct 4516 GTCGGAGGTGATCCGGAGCATGAGCTCCTGCATGAAGCCTGCGACCTTGCCGGTGAGCAC 4457 Query 59818 AGCAAGGTCGTATTGCCCTTTAACAAAGTCATAGGAGAAGCGGTCTTCCCAAGCTCCTAC 59877 |||| ||||| ||| | || || || |||| ||||||||||||||| || || | Sbjct 4456 AGCATTCTCGTACTGCGTTGCAATGAACTCGTAGGTGAAGCGGTCTTCCCAGGCGCCGAT 4397 Query 59878 AAATTCTTCACGAGAACATGGGAATTTCTCACAAATAGGGAATACGTTTACGTACCAACC 59937 || |||||||| | |||||| | |||||| | || | ||||| || | ||| | Sbjct 4396 GAACTCTTCACGCGTACATGGCCAGCGCTCACAGACCGGCCAGACGTTGACATCCCAGGC 4337 Query 59938 CCCTGATTCTACTGCTTCATAGAGAATATCGTTTTTATTAAAGGGTGTTCCACTGAAAAC 59997 || ||||| || || || | || || | || || || || ||| |||| || Sbjct 4336 GCCGGATTCCACCGCCTCGATCATGATGTCTTCGGCATGGAAAGGCGTACCATTGAAGAC 4277 Query 59998 AATCTTTCTACGTACAGGGTCGAGAGCATAATCAACACCTTTGTACACAGTATCTTTGAT 60057 ||||| | ||| || ||||| || |||| ||||| ||||| || ||||| ||||| Sbjct 4276 GATCTTGCGACGGGTTGGATCGAGTGCGTAATTCACACCCTTGTAGACCGTATCCTTGAT 4217 Query 60058 TGCCTGCATAGTTGACTTGGATTTAGCATCATCATCACTAACCAAGTCATCCAATACAGC 60117 || | ||| | | | ||| || || |||||||| | || ||| || | | || Sbjct 4216 GGCATTCATTGCCGCCACGGACTTGGCGTCATCATCCGAGATCAGGTCGTCGAGGATTGC 4157 Query 60118 TAAAACAGGACGTTTACCAAAGATTTTAGTACCACGAAGACCTGTCTTAGCACCAAACAT 60177 | || || || || ||||| || ||||| || | ||| ||||| || |||||||| Sbjct 4156 CAGCGGCGGGCGCTTGCCGAAGATCTTCGTACCGCGGATACCAGTCTTGGCGCCAAACAT 4097 Query 60178 ACGTACACCTAGCTTATGCCCATCAGCATTAGTGAATTCTAGGTATGCATCAGTGAATTT 60237 | || || || ||||| || ||||| || || || || ||||| | Sbjct 4096 CTTGATGCCGAGACGGTGACCATCCTTGTTGGTGAACTCCAGATAATTGTCGGTGAAGGT 4037 Query 60238 GGCTTCAGGAATATACTTCTGAAGGAATTCAGAGTTGTTATAACGGTATTCGATGTTCTT 60297 || ||||| | | | || ||||| || || |||| || ||| | || |||||||| Sbjct 4036 TGCGTCAGGCAGCCATTCCTTCAGGAAGTCGGAATTGTGGTAGCGGAACTCAATGTTCTT 3977 Query 60298 TCTAAGTGAT-TTTACCCCGTTTTCCATTGAGTCTGAGACATAAATCATACCTTCAATTT 60356 | | | | || || ||||| ||||| || || || ||||| ||||| || ||| | Sbjct 3976 GC-GGGCGCTCTTGACGCCGTTGTCCATCGAATCCGACACATAGATCATGCCGGTAATGT 3918 Query 60357 CACCAAACCCATCAATTTCCCCATATAAGGCAATATACAGAACCAGATACTCACCAAATA 60416 | || || || | | || || | |||||| ||||||||||||| || || | Sbjct 3917 CGCCGAAGCCGGGCAGCACGCCGTAGACGGCAATGAACAGAACCAGATATTCGAAGAAGA 3858 Query 60417 GGGTAGTTTTAGCCATACCACGAGAGCAAAGATTAGCTAATCGAGT---ACGTTTAC-CT 60472 | || || || ||| |||||| |||| ||||| || |||| | ||||| || Sbjct 3857 GCGTGGTCTTGGCCGCACCACGGAAGCAGAGATTGGC-AATCTGTTCAGACGTTGACGAC 3799 Query 60473 GCTAATTCATCAAGCATCTTAAGATGAACAACAGGAGTAAGGTTAGATTCACCTGCTTCA 60532 | | | || |||||||| || |||||| || || || ||||| | | Sbjct 3798 GACAGCTTGTCCAGCATCTTCAGGTGAACAGGTGGCGTCTTGTGGCTCTCACCCTCGGCC 3739 Query 60533 CCATTAACCATCTTGATAAAGTTCACATAGTTAATTGCAAATACAGAAGGAACATAGTTA 60592 || || |||| |||||| ||||||| |||| | | || || |||| || || ||| | Sbjct 3738 CCGTTCACCAGCTTGATGAAGTTCATATAGATGAGCGCGAACTCAGACGGGACGTAGGTT 3679 Query 60593 CCATCATTGAG 60603 || | ||||| Sbjct 3678 CCGTTGTTGAG 3668 Score = 96.9 bits (106), Expect = 2e-15 Identities = 135/186 (73%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 19943 AAAGGTTGGCTTCTTATT-GGATTAGACTTTGCATCTCTAGAGGACCGTATTTCAGCTCT 20001 || |||||| ||||| | || | ||||| |||| ||||| |||||||| || || || Sbjct 49537 AAGGGTTGG-TTCTTCTGCGGCATCGACTTCTCATCACTAGAAGACCGTATCTCGGCACT 49479 Query 20002 GACAACCAAAGACCCCAATAAACTTAAAGTTTATACTGATGGGTATGATGGTCATTCTCT 20061 ||| ||||| || || || || || ||||| || || ||||| ||||| || || || || Sbjct 49478 GACGACCAAGGATCCAAACAAGCTGAAAGTCTACACCGATGGCTATGACGGCCACTCCCT 49419 Query 20062 CAGAGCATTCGCTTATTTTGGCGACCAGATGCCTGATAT---TCAGAATACAGTGGAAAG 20118 | || || ||||| || ||||||||||| || || || |||| |||| |||| Sbjct 49418 GCGTGCCGTCAGCTATTTCGGTGACCAGATGCCGGACATCGATCCGAATTCAGTACAAAG 49359 Query 20119 TATTAA 20124 || || Sbjct 49358 CATCAA 49353 >seq1007 Length=53843 Score = 286 bits (316), Expect = 2e-72 Identities = 800/1211 (66%), Gaps = 19/1211 (2%) Strand=Plus/Minus Query 59404 AGAAGCAAAATTGAACCAAATATTACGAGTCATCATCTCATTCTGGAGT-AGTGGAATGA 59462 |||||| || |||||||| || ||||| | ||||| | ||| || | | || ||| Sbjct 4870 AGAAGCGAAGTTGAACCAGATGTTACGGACCTGCATCTGCTCCTGCAGCCACTTGA-TGA 4812 Query 59463 AC-CCACCTTGTTGACCTGTAACTTCAATGCCTACAGATTGAGGTTGGTAC-TCTACAAC 59520 | ||| || | || || || ||||| | ||| || || || || | ||| ||| ||| Sbjct 4811 AGGCCAGCT-GCTGGCCGGTGACTTCGACGCCGACGGACTGCGGATTATACATCTG-AAC 4754 Query 59521 TAGTCTGAATAGGTCATCAAAGTTCTTATCCATTAACTGACGTCTACAAATACCATCAAC 59580 | | ||| || ||||| | ||| ||||| |||| || | ||||||||| Sbjct 4753 CAAACGGAACAGTTCATCGATCGACTTGTCCATCGTGGTACGTTCGCAGAAACCATCAAC 4694 Query 59581 CCAGAACCAATCTCCATTAGAGTTGATAGCCCATACAGAGATAACTGAATAGTCAGCAGA 59640 ||||||||| || ||||| |||| ||||| |||||||| || || |||| || | Sbjct 4693 CCAGAACCAGTCGCCATTCCAGTTATGTGCCCAGACAGAGATGACCGAGAAGTCGGCCGT 4634 Query 59641 CTGTTTTTCAGAAGTAGCAAAGTCAGTAGTGATATAGAAATTAAAATGACCTCGATTCAA 59700 |||||| || || || |||||||| || ||||||||||| || | | ||| ||| Sbjct 4633 CTGTTTGTCCGAGGTCGCAAAGTCGGTCGTGATATAGAAGTTGTAG-GCGCTC--TTCTG 4577 Query 59701 ---CAGAAGAGACTTACGCTTGTACCATTGGATATCAGAATCCATGACAAGTCTCTCTTC 59757 |||||| | |||||||| | ||| || | |||| ||| || | ||| || Sbjct 4576 GTTCAGAAGCAAAGCGCGCTTGTATTCCTTGATCTCCGCATCCTGGACCAGACGCTCCTC 4517 Query 59758 ATCGGAGGTAATTCGTAGCATCAATTCCTGATTGAAAGCAGCAACCTGTCCAGTTGATAC 59817 |||||||| || || ||||| | ||||| |||| | || |||| || || || Sbjct 4516 GTCGGAGGTGATCCGGAGCATGAGCTCCTGCATGAAGCCTGCGACCTTGCCGGTGAGCAC 4457 Query 59818 AGCAAGGTCGTATTGCCCTTTAACAAAGTCATAGGAGAAGCGGTCTTCCCAAGCTCCTAC 59877 |||| ||||| ||| | || || || |||| ||||||||||||||| || || | Sbjct 4456 AGCATTCTCGTACTGCGTTGCAATGAACTCGTAGGTGAAGCGGTCTTCCCAGGCGCCGAT 4397 Query 59878 AAATTCTTCACGAGAACATGGGAATTTCTCACAAATAGGGAATACGTTTACGTACCAACC 59937 || |||||||| | |||||| | |||||| | || | ||||| || | ||| | Sbjct 4396 GAACTCTTCACGCGTACATGGCCAGCGCTCACAGACCGGCCAGACGTTGACATCCCAGGC 4337 Query 59938 CCCTGATTCTACTGCTTCATAGAGAATATCGTTTTTATTAAAGGGTGTTCCACTGAAAAC 59997 || ||||| || || || | || || | || || || || ||| |||| || Sbjct 4336 GCCGGATTCCACCGCCTCGATCATGATGTCTTCGGCATGGAAAGGCGTACCATTGAAGAC 4277 Query 59998 AATCTTTCTACGTACAGGGTCGAGAGCATAATCAACACCTTTGTACACAGTATCTTTGAT 60057 ||||| | ||| || ||||| || |||| ||||| ||||| || ||||| ||||| Sbjct 4276 GATCTTGCGACGGGTTGGATCGAGTGCGTAATTCACACCCTTGTAGACCGTATCCTTGAT 4217 Query 60058 TGCCTGCATAGTTGACTTGGATTTAGCATCATCATCACTAACCAAGTCATCCAATACAGC 60117 || | ||| | | | ||| || || |||||||| | || ||| || | | || Sbjct 4216 GGCATTCATTGCCGCCACGGACTTGGCGTCATCATCCGAGATCAGGTCGTCGAGGATTGC 4157 Query 60118 TAAAACAGGACGTTTACCAAAGATTTTAGTACCACGAAGACCTGTCTTAGCACCAAACAT 60177 | || || || || ||||| || ||||| || | ||| ||||| || |||||||| Sbjct 4156 CAGCGGCGGGCGCTTGCCGAAGATCTTCGTACCGCGGATACCAGTCTTGGCGCCAAACAT 4097 Query 60178 ACGTACACCTAGCTTATGCCCATCAGCATTAGTGAATTCTAGGTATGCATCAGTGAATTT 60237 | || || || ||||| || ||||| || || || || ||||| | Sbjct 4096 CTTGATGCCGAGACGGTGACCATCCTTGTTGGTGAACTCCAGATAATTGTCGGTGAAGGT 4037 Query 60238 GGCTTCAGGAATATACTTCTGAAGGAATTCAGAGTTGTTATAACGGTATTCGATGTTCTT 60297 || ||||| | | | || ||||| || || |||| || ||| | || |||||||| Sbjct 4036 TGCGTCAGGCAGCCATTCCTTCAGGAAGTCGGAATTGTGGTAGCGGAACTCAATGTTCTT 3977 Query 60298 TCTAAGTGAT-TTTACCCCGTTTTCCATTGAGTCTGAGACATAAATCATACCTTCAATTT 60356 | | | | || || ||||| ||||| || || || ||||| ||||| || ||| | Sbjct 3976 GC-GGGCGCTCTTGACGCCGTTGTCCATCGAATCCGACACATAGATCATGCCGGTAATGT 3918 Query 60357 CACCAAACCCATCAATTTCCCCATATAAGGCAATATACAGAACCAGATACTCACCAAATA 60416 | || || || | | || || | |||||| ||||||||||||| || || | Sbjct 3917 CGCCGAAGCCGGGCAGCACGCCGTAGACGGCAATGAACAGAACCAGATATTCGAAGAAGA 3858 Query 60417 GGGTAGTTTTAGCCATACCACGAGAGCAAAGATTAGCTAATCGAGT---ACGTTTAC-CT 60472 | || || || ||| |||||| |||| ||||| || |||| | ||||| || Sbjct 3857 GCGTGGTCTTGGCCGCACCACGGAAGCAGAGATTGGC-AATCTGTTCAGACGTTGACGAC 3799 Query 60473 GCTAATTCATCAAGCATCTTAAGATGAACAACAGGAGTAAGGTTAGATTCACCTGCTTCA 60532 | | | || |||||||| || |||||| || || || ||||| | | Sbjct 3798 GACAGCTTGTCCAGCATCTTCAGGTGAACAGGTGGCGTCTTGTGGCTCTCACCCTCGGCC 3739 Query 60533 CCATTAACCATCTTGATAAAGTTCACATAGTTAATTGCAAATACAGAAGGAACATAGTTA 60592 || || |||| |||||| ||||||| |||| | | || || |||| || || ||| | Sbjct 3738 CCGTTCACCAGCTTGATGAAGTTCATATAGATGAGCGCGAACTCAGACGGGACGTAGGTT 3679 Query 60593 CCATCATTGAG 60603 || | ||||| Sbjct 3678 CCGTTGTTGAG 3668 Score = 96.9 bits (106), Expect = 2e-15 Identities = 135/186 (73%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 19943 AAAGGTTGGCTTCTTATT-GGATTAGACTTTGCATCTCTAGAGGACCGTATTTCAGCTCT 20001 || |||||| ||||| | || | ||||| |||| ||||| |||||||| || || || Sbjct 49537 AAGGGTTGG-TTCTTCTGCGGCATCGACTTCTCATCACTAGAAGACCGTATCTCGGCACT 49479 Query 20002 GACAACCAAAGACCCCAATAAACTTAAAGTTTATACTGATGGGTATGATGGTCATTCTCT 20061 ||| ||||| || || || || || ||||| || || ||||| ||||| || || || || Sbjct 49478 GACGACCAAGGATCCAAACAAGCTGAAAGTCTACACCGATGGCTATGACGGCCACTCCCT 49419 Query 20062 CAGAGCATTCGCTTATTTTGGCGACCAGATGCCTGATAT---TCAGAATACAGTGGAAAG 20118 | || || ||||| || ||||||||||| || || || |||| |||| |||| Sbjct 49418 GCGTGCCGTCAGCTATTTCGGTGACCAGATGCCGGACATCGATCCGAATTCAGTACAAAG 49359 Query 20119 TATTAA 20124 || || Sbjct 49358 CATCAA 49353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230584587358801