Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq998 111 2e-18
>seq998
Length=1052685
Score = 111 bits (122), Expect = 2e-18
Identities = 274/408 (67%), Gaps = 26/408 (6%)
Strand=Plus/Minus
Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGG-CGGGCGTCGGCTGCATCATCGACGGCGTGCC 18146
||||||||||||||||| ||||||| || || | |||||| | | || ||| ||
Sbjct 820586 GTCACCACCTTTGGCGAAAGCCACGGGGTCGCGCTT-GGCTGCGTGGTGGATGGCTGCCC 820528
Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206
|||| | || || ||| ||| | || |||||| | | || || ||| ||| ||
Sbjct 820527 GCCGCGGATTCCGCTGACCGTTGAGGAAATCCAGTTGGACCTCGACCGTCGCAAACCCGG 820468
Query 18207 CCAGGGCGCACTTT-CCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGC- 18264
|||| ||| ||| |||| | ||| | || |||||| |||| || | ||| |||
Sbjct 820467 CCAGT-CGCGCTTCACCACCCAGCGGCAGGAAGCCGATCAGGTCAAGATTCTGTCCGGCG 820409
Query 18265 --------ACGGAGAACGGCC---TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCA 18313
|| ||| ||| | | ||| |||| |||| ||| || | | | |
Sbjct 820408 TGATGGAGACCGAGCGCGGGCAGGTGACGACCGGCGCGCCGATCGCGCTGATGATCGAGA 820349
Query 18314 ACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCG---CGGCCCTCAC 18370
|| ||||||||| | |||||||||||||| ||||| | || ||| |
Sbjct 820348 ACACCGACCAGCGCTCGAAGGACTATTCCGACAT---CAAGGACAAGTATCGTCCCGGCC 820292
Query 18371 ACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGG--GCGGAGGCCG 18428
||||||||||||||||| |||||| ||||||||| ||| | | | |||| |||||
Sbjct 820291 ACGCCGACTACACCTACGAGGCCAAATACGGCATCC--GCGACTACCGCGGCGGCGGCCG 820234
Query 18429 GTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGC 18476
||||| || ||||| ||| ||||||||| || |||||||||||
Sbjct 820233 CTCGTCGGCGCGCGAAACCGCTGCGCGCGTCGCGGCAGGCGCGGTCGC 820186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107016185040183
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |