Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq998 111 2e-18 >seq998 Length=1052685 Score = 111 bits (122), Expect = 2e-18 Identities = 274/408 (67%), Gaps = 26/408 (6%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGG-CGGGCGTCGGCTGCATCATCGACGGCGTGCC 18146 ||||||||||||||||| ||||||| || || | |||||| | | || ||| || Sbjct 820586 GTCACCACCTTTGGCGAAAGCCACGGGGTCGCGCTT-GGCTGCGTGGTGGATGGCTGCCC 820528 Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206 |||| | || || ||| ||| | || |||||| | | || || ||| ||| || Sbjct 820527 GCCGCGGATTCCGCTGACCGTTGAGGAAATCCAGTTGGACCTCGACCGTCGCAAACCCGG 820468 Query 18207 CCAGGGCGCACTTT-CCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGC- 18264 |||| ||| ||| |||| | ||| | || |||||| |||| || | ||| ||| Sbjct 820467 CCAGT-CGCGCTTCACCACCCAGCGGCAGGAAGCCGATCAGGTCAAGATTCTGTCCGGCG 820409 Query 18265 --------ACGGAGAACGGCC---TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCA 18313 || ||| ||| | | ||| |||| |||| ||| || | | | | Sbjct 820408 TGATGGAGACCGAGCGCGGGCAGGTGACGACCGGCGCGCCGATCGCGCTGATGATCGAGA 820349 Query 18314 ACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCG---CGGCCCTCAC 18370 || ||||||||| | |||||||||||||| ||||| | || ||| | Sbjct 820348 ACACCGACCAGCGCTCGAAGGACTATTCCGACAT---CAAGGACAAGTATCGTCCCGGCC 820292 Query 18371 ACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGG--GCGGAGGCCG 18428 ||||||||||||||||| |||||| ||||||||| ||| | | | |||| ||||| Sbjct 820291 ACGCCGACTACACCTACGAGGCCAAATACGGCATCC--GCGACTACCGCGGCGGCGGCCG 820234 Query 18429 GTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGC 18476 ||||| || ||||| ||| ||||||||| || ||||||||||| Sbjct 820233 CTCGTCGGCGCGCGAAACCGCTGCGCGCGTCGCGGCAGGCGCGGTCGC 820186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107016185040183