Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq931 304 6e-78 seq998 242 2e-59 seq1095 235 3e-57 >seq931 Length=105225 Score = 304 bits (336), Expect = 6e-78 Identities = 586/851 (69%), Gaps = 19/851 (2%) Strand=Plus/Minus Query 67574 ACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTA 67633 ||||||||| | | ||||||| || || |||||||| || || || ||||| Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGCGGGTG 85313 Query 67634 GTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCC 67693 | ||| | | ||| || || || || || ||| | || || ||| ||| ||||||| Sbjct 85312 ATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGCG 85253 Query 67694 AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCT 67753 | | ||||||| || ||| |||||||| | | ||||||||||| | || ||||| Sbjct 85252 GAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCCC 85193 Query 67754 GAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACT 67813 | || ||| | ||| || || || | || |||| |||| |||||| ||||| Sbjct 85192 GTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACACG 85133 Query 67814 GGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATC 67873 ||||||||||| ||||||||||| ||| || || || |||| || |||| | Sbjct 85132 GGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGTG 85073 Query 67874 GTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGAC 67933 || || ||||| || || |||||| ||||| || || ||||||| || || || ||| Sbjct 85072 GTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGAC 85013 Query 67934 TCGCACGTCGGC-CTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCAC 67992 || | ||| || || ||||| |||||| ||||| ||||||||||||||| | | Sbjct 85012 A-GCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954 Query 67993 GATTGCCAGCACCAACACGC-TCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA 68051 ||| ||| | || | || || ||||| | || ||| | || | ||||||||| Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895 Query 68052 ACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCT 68111 | || ||||| || || ||||| || || || || || ||| |||||||||| Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838 Query 68112 CGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 68171 ||||||| |||| ||||| | | || | | ||| | ||||||||| ||||||| Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778 Query 68172 ACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGT 68231 || ||| ||||| ||||| |||||||||||| | || || ||| |||| ||| | | | Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGG-TCA-T 84720 Query 68232 TTTC--CATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGT 68289 ||| |||| | |||||||| ||||| ||| || ||| || ||||| ||| || Sbjct 84719 CTTCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCG- 84661 Query 68290 TTCCCGAGGGC-TCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCG 68348 | | |||| | ||| ||||| | || |||||||| |||| | ||||| Sbjct 84660 TCAAGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACGATTCAACCCGCATCG 84601 Query 68349 GCCAGGGCAAGCCCAAGACCGTGC---AGTGGCTGAAGGACAACCCGGACGTCGCCGCCT 68405 |||||||| | | ||| |||| ||| ||||| | ||||| ||| ||||||||| Sbjct 84600 GCCAGGGC---CGCGAGAATGTGCGCGAGTTCCTGAAACAGAACCCCGACATCGCCGCCT 84544 Query 68406 CCATCGAACAG 68416 |||||||| || Sbjct 84543 CCATCGAAAAG 84533 >seq998 Length=1052685 Score = 242 bits (268), Expect = 2e-59 Identities = 499/741 (67%), Gaps = 11/741 (1%) Strand=Plus/Plus Query 67589 CTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGT 67648 || ||| ||| |||||| |||| ||| |||| ||||||||| || ||||| |||||| Sbjct 138318 CTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTCGAGATTTACGGT 138377 Query 67649 CCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCC 67708 ||||| || || || ||| | ||| || || || |||||||| | ||||||||| Sbjct 138378 CCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAGGCCCAGAAGAAG 138437 Query 67709 GGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCG 67768 || |||| | |||| |||||||||||||||| | || ||||| | || ||| | Sbjct 138438 GGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTCTATGCCCGCAAG 138497 Query 67769 CTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTG 67828 ||||| || ||||||| | || || || ||||| ||| |||||| ||||| || Sbjct 138498 CTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGCGAACAGGCGCTT 138557 Query 67829 GAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTG 67888 ||||||| || || || || |||| ||| | | | | || || || || Sbjct 138558 GAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCGTCGATTCGGTC 138617 Query 67889 GCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTG 67948 || || || |||||||| || || ||||| || || || || ||| ||| || || Sbjct 138618 GCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCGCTGCCGGGTTTG 138677 Query 67949 CATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAAC 68008 || || ||| ||||| ||||| ||||||||||||| | |||| || || || Sbjct 138678 CAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATCAACAAGTCCCAC 138737 Query 68009 ACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCG 68068 || | | | | || ||| | ||| ||||||||| ||| |||||| || Sbjct 138738 ACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG---GGTGATGTACGGCTCG 138794 Query 68069 AATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTC 68128 || ||||| || || || || || ||| ||||| ||||| || || | || | Sbjct 138795 CCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTCCGCCTCGACATT 138854 Query 68129 CGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAG 68188 ||| | |||| | | ||||| |||| |||| |||||||| ||| ||||| ||| Sbjct 138855 CGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCCACCCGCGTCAAG 138914 Query 68189 GTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGC 68248 || || ||||||||||| ||||| ||| | |||| || || |||| | |||||| Sbjct 138915 GTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGGC 138974 Query 68249 GAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTCCCGAGGGC----TCAT 68304 ||||| | ||| || ||| ||||||| | | ||| | ||| | || | Sbjct 138975 GAGGGTGTCTCCAAGATGGGCGAGATCCTCGATCTTGGCGT----CAAGGCCGGCATCGT 139030 Query 68305 CAAGAAGTCTGGGGCCTGGTT 68325 | ||||||| || |||||||| Sbjct 139031 CGAGAAGTCCGGCGCCTGGTT 139051 >seq1095 Length=1089284 Score = 235 bits (260), Expect = 3e-57 Identities = 498/742 (67%), Gaps = 11/742 (1%) Strand=Plus/Minus Query 67589 CTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGT 67648 |||||| ||| |||||| |||| ||| |||| ||| || | || || || ||||| Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708 Query 67649 CCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCC 67708 || || || || || ||| | ||| || || || ||||| | || |||||| Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648 Query 67709 GGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCG 67768 || |||| ||||| |||||| |||||||| | ||||| || | || ||| | Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588 Query 67769 CTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTG 67828 ||||| || |||||||| | || || | |||||| ||| ||| |||||||| ||| Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528 Query 67829 GAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTG 67888 || || | || || || || |||| ||| | | | | | || || ||| Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468 Query 67889 GCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTG 67948 || || |||||||| || || || |||||||| || || || || || |||| || Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCCCGGCTTG 868408 Query 67949 CATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAAC 68008 || || || |||||| ||||| ||||||||||||| | | |||| || ||||| Sbjct 868407 CAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAAC 868348 Query 68009 ACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCG 68068 || | | | | || ||| | ||| ||||||||| ||| || ||| || Sbjct 868347 ACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTCG 868291 Query 68069 AATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTC 68128 || ||||||||||| || || || ||| |||||||| |||||||| | || || Sbjct 868290 CCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACATC 868231 Query 68129 CGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAG 68188 ||| | |||| | || ||||| |||| |||| ||||||||| ||| ||||| ||| Sbjct 868230 CGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAAG 868171 Query 68189 GTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGC 68248 || || |||||||||||||| || ||| | |||| || || |||| | |||||| Sbjct 868170 GTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGGC 868111 Query 68249 GAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTCCCGAGGGC----TCAT 68304 ||||| | || || |||| |||||||| | | ||| | ||| | || | Sbjct 868110 GAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGT----CAAGGCCGGCATCGT 868055 Query 68305 CAAGAAGTCTGGGGCCTGGTTC 68326 | | ||||| || ||||||||| Sbjct 868054 CGAAAAGTCGGGCGCCTGGTTC 868033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247445079327792