Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_022065.1
Length=74533
Score E
Sequences producing significant alignments: (Bits) Value
seq931 325 2e-84
seq998 271 4e-68
seq1095 269 1e-67
seq743 93.3 2e-14
>seq931
Length=105225
Score = 325 bits (360), Expect = 2e-84
Identities = 533/762 (70%), Gaps = 7/762 (1%)
Strand=Plus/Minus
Query 65045 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 65103
|||||||| | | ||||||| || ||||||||||| || | || | |||| ||||
Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314
Query 65104 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 65163
| | || | | |||||| ||||| || || ||| | || ||| || ||| |||||||
Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254
Query 65164 CAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCC 65223
| | |||||| || ||| |||||||| | | ||||| || ||| | ||||||||
Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194
Query 65224 TGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 65283
| || ||| || ||| || || | || || | || ||||| ||||| |||||
Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134
Query 65284 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 65343
||||||||||| ||||||||||| ||| || || || |||| || ||||||
Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074
Query 65344 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 65403
|| || ||||| || || |||||| |||||||| || |||||||||| || || ||
Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014
Query 65404 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 65463
||| | || || || || || || ||| ||||| |||||||||| |||| | |
Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954
Query 65464 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 65522
||||||| | || | || | || | |||||||| | || | |||||||||
Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895
Query 65523 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 65582
| || ||||| || || ||||| ||||||||||| || ||| |||||||||||
Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838
Query 65583 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 65642
| || || |||| |||| |||| || | | ||| | ||||||||| |||||||
Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778
Query 65643 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 65702
|| |||||| || ||||| |||||||||||| | ||||||||| |||| | | | |
Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718
Query 65703 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 65762
|| | || ||||||| || |||||||| || ||| || ||||||||| |||
Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658
Query 65763 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65804
| |||| || | ||||| ||||| |||||||| ||||
Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616
>seq998
Length=1052685
Score = 271 bits (300), Expect = 4e-68
Identities = 512/750 (68%), Gaps = 5/750 (1%)
Strand=Plus/Plus
Query 65048 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 65107
||||| ||| || ||| ||| || ||| |||| ||| |||| ||||||||||||
Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365
Query 65108 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 65167
|| || ||||| || ||||| || || ||| | || ||| || || |||||||| |
Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425
Query 65168 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 65227
|| |||||| || |||| | |||| ||||||||| || || | |||||||| |
Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485
Query 65228 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65287
|| ||| |||||| || | |||| | || || | ||||| ||| ||||
Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545
Query 65288 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 65347
|| ||||| || ||||||| || || || || |||| | || | | | ||
Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605
Query 65348 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 65407
|| || || || || || || |||||||||||||| ||||| || || || || |||
Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665
Query 65408 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATC 65467
| || |||| |||||| | ||| ||||| |||||||||| || | | |||
Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725
Query 65468 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 65527
|| || |||| || | ||| |||||||| | ||| ||||||||| |||
Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782
Query 65528 GGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTC 65587
|||||| || || ||||| ||||||||||| || ||| ||||| ||||| |||
Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842
Query 65588 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 65647
||| | || | || ||||||| | | ||||| |||| |||| |||||||| |
Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902
Query 65648 ACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCC 65707
||||| || ||||| || ||||||||||| || |||||| | | | ||| ||| |
Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962
Query 65708 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 65766
|| ||||||| ||||| |||| | || || ||| ||||||| || | ||| |
Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021
Query 65767 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 65796
||| | || ||||||| |||||||||||
Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051
>seq1095
Length=1089284
Score = 269 bits (298), Expect = 1e-67
Identities = 505/739 (68%), Gaps = 5/739 (1%)
Strand=Plus/Minus
Query 65060 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65119
|||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| |||||
Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708
Query 65120 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65179
|| ||||| || || ||| | || ||| || || ||||| | || ||||||
Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648
Query 65180 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65239
|| |||| ||||| |||||| || || ||| | || || || | || ||| |
Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588
Query 65240 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 65299
||||| || | ||||| | || || | ||||| ||| ||| |||||||| |||
Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528
Query 65300 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 65359
|| || | || || || || |||| | || | | | || | || || |||
Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468
Query 65360 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 65418
|| || |||||||| |||||||| ||||||||||| || || || || | |||| |
Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409
Query 65419 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA 65478
||| || || || ||| ||||| |||||||||| || | | | ||| || ||||
Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349
Query 65479 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 65538
||| || | | | |||||||| | ||| ||||||||| ||| || ||| |
Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292
Query 65539 GAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 65598
| || |||||||| |||||||| || ||| ||||||||| || || || | || |
Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232
Query 65599 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 65658
||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || ||
Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172
Query 65659 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 65718
||| || |||||||||||||| |||||| | | | ||| ||| | || |||||||
Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112
Query 65719 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 65778
||||| | ||| || |||| |||||||||| | ||| | ||| | || |
Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052
Query 65779 GAAGTCGGGCGCCTGGTTC 65797
||||||||||||||||||
Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033
>seq743
Length=263205
Score = 93.3 bits (102), Expect = 2e-14
Identities = 184/266 (69%), Gaps = 10/266 (4%)
Strand=Plus/Minus
Query 58264 GGATTCATGGGCAAGAAGTGGGACGGCTCGGGC---ATCGCTTTCGATGTCGAGATGTGG 58320
||||||||||||||| | ||||| | ||||| |||| ||| | || | |||
Sbjct 30995 GGATTCATGGGCAAGCAATGGGA---CACGGGCGAGGTCGCCTTCTCGGAAGAATTCTGG 30939
Query 58321 GAGCAATGTCTGCGGGTCCTCAAGCCGGGTGGGCACCT-GCTCGCCTTCGGCGGCTCCCG 58379
|| ||||| || || || || || |||||| | ||| || ||||||| || ||
Sbjct 30938 TCCGAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCG 30880
Query 58380 CACCTGGCACCGGCTGACCGTG-GCCATCGAGGACGCGGGCTTCGAGATTCGTGACTCCA 58438
| || ||||| || |||| || ||||| || ||||| || || || || |||||
Sbjct 30879 CGGCTATCACCGCATG-GCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGC 30821
Query 58439 TCGCGTGGCTCTACGGCAGCGGGTTCCCGAAGTCGCTCGACGTATCCAAGGCCATTGACA 58498
|| |||| | || || | ||||| |||||||||| || || ||||| ||||| |
Sbjct 30820 TCATGTGGATTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATA 30761
Query 58499 AGGCTGCTGGTGCTGAGCGCGAGGTG 58524
| || || ||||| || || ||||||
Sbjct 30760 AAGCGGCGGGTGCGGAACGTGAGGTG 30735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238376445006266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |