Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_022066.1
Length=108297
Score E
Sequences producing significant alignments: (Bits) Value
seq792 107 1e-18
seq1158 91.5 1e-13
seq1191 89.7 4e-13
>seq792
Length=204027
Score = 107 bits (118), Expect = 1e-18
Identities = 148/206 (72%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 95452 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 95511
|| || || || ||||| || ||||| || ||||| | || || ||||||| |
Sbjct 144658 GGATCAGTAACAACCGGGGTCAGCAGGTGTGGAATACCATCATAGATGGACAGTTCCAGC 144599
Query 95512 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 95571
|||||||| || | |||||| || | || || ||| |||||||||| ||
Sbjct 144598 ATCTTCGGATCAACCATGATCAGGCGGCATTCTTCCGGCTTGAAACGGTAGAGCAGCGAC 144539
Query 95572 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 95631
| | ||||| ||||||| | ||||| ||||| ||||||| ||| |||||||| |||
Sbjct 144538 AGGATCATCGTGTTGATGGCGACCGACTTACCCGAACCGGTGGTGCCTGCCACCAGAAGG 144479
Query 95632 TGGGGCATTTTGGCCAGGTTCAGGGA 95657
|| ||||||||||||| |||||| ||
Sbjct 144478 TGAGGCATTTTGGCCA-GTTCAGCGA 144454
>seq1158
Length=42521
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 95440 ACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGG 95499
|| |||| | ||| |||||||| || ||| || ||||| || || |||| ||
Sbjct 20815 ACGGCCTTCTTGGGATCGGTGACAACGGGCGCCAGCAGGTGCGGAATGCCGTCATAGACC 20756
Query 95500 GTGAGTTCCACCATCTTCGGGTCGATCATGATGA-GCTTGACCCGATCAGGAT-TGGCTC 95557
| || |||| |||||| |||||||||||||||| || || || | || | ||||
Sbjct 20755 GACAGCTCCAGCATCTTGGGGTCGATCATGATGAAGCGGCACTCGGCCGGGCTGTGGC-- 20698
Query 95558 GGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGC 95617
| || || || || | | ||| | ||||| | ||||||||||| ||||||| ||
Sbjct 20697 GATACAGGATCGACAGGATCATGGCGTTGACCCCGACCGACTTGCCCGAGCCGGTGGTGC 20638
Query 95618 CAGCCACCAGCAGGTGGGGCATTTTGGCCAGGT 95650
| || | ||||||||||||||| |||||||
Sbjct 20637 CCGCGATCAGCAGGTGGGGCATGCGCGCCAGGT 20605
>seq1191
Length=688723
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/202 (71%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 95440 ACCGCCT-CGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGG 95498
||||||| | ||||| || || || || || || || || ||||| |||| ||
Sbjct 597364 ACCGCCTTCTTCGGG-TCTGTCACGACGGGTGTCAGCAGATGCGGGATGCCGTCATAGAC 597422
Query 95499 GGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCC-GATCAGGATTGGCTC 95557
|| |||||| | |||||||||||||| ||||||||| ||| | | || || | |
Sbjct 597423 GGAGAGTTCGAGCATCTTCGGGTCGACCATGATGAGGC-GACACTGGTCGGGCCTCAGCC 597481
Query 95558 GGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGC 95617
||||||||| || | | ||| | ||| ||| | ||||||||||| ||||||| ||
Sbjct 597482 GGTAGAGCAGCGACAGGATCATGGTGTTAATGCCGACCGACTTGCCCGAGCCGGTGGTGC 597541
Query 95618 CAGCCACCAGCAGGTGGGGCAT 95639
| || | |||||| || |||||
Sbjct 597542 CGGCGATCAGCAGATGCGGCAT 597563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346419271129062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |