Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_022068.1 Length=58043 Score E Sequences producing significant alignments: (Bits) Value seq743 109 2e-19 >seq743 Length=263205 Score = 109 bits (120), Expect = 2e-19 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 42065 CCTGCGCGTGCTGAAACCGGGCGGGCACCT-GCTCGCGTTCGGCGGTTCGCGCACCTGGC 42123 |||||||||||||||||| ||||||||| | ||| |||||||||| |||||| || | Sbjct 30930 CCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCGCGGCTATC 30872 Query 42124 ACCGGCTAGCGGCGGCGATCGAGGACGCCGGGTTCGAGATCCGCGACTCCATCGCCTGGC 42183 |||| | ||| |||||||| || || ||||| || ||||||||||| || ||| Sbjct 30871 ACCGCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCATGTGGA 30812 Query 42184 TGTACGGCAGCGGAATGCCCAAGTCGCTCGACGTGTCCAAGGCGATTGACAA 42235 | || || | || | || ||||||| || ||| ||||| |||||| || Sbjct 30811 TTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAA 30760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185612695919190