Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq1045 109 9e-19 seq890 84.2 4e-11 >seq1045 Length=73698 Score = 109 bits (120), Expect = 9e-19 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || Sbjct 30885 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTCGGTTCGAGCCCGAG 30944 Query 122833 ACGTCCTACCATATAAATGCCGC 122855 | | | |||||| |||| |||| Sbjct 30945 AGGACGTACCATTTAAAGCCCGC 30967 >seq890 Length=125401 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 186167 TGCGCGTCGCCGAACGTGTGGAACAGCTTGCCTGATGCCAGGCCGAATGCCTGTGCCAGC 186226 || ||||||||||| || |||| | || ||| | |||| || | |||| |||| | Sbjct 47159 TGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCTCCAGACCCACGACCTGGGCCACC 47218 Query 186227 ATGTGCGTCATGATAGAGTAGAAGCCGAAGTTAAAAGGCACGCCGAGGAAGAAATCCCCG 186286 || | |||| | | |||| || ||| ||| || |||||||| ||||||| || || Sbjct 47219 ATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCG 47278 Query 186287 CTACGCTGATAGAGCTTGCAG 186307 ||||||||||| |||| |||| Sbjct 47279 CTACGCTGATACAGCTGGCAG 47299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825901324383960