Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_022329.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq1494 86.0 2e-12 >seq1494 Length=1074632 Score = 86.0 bits (94), Expect = 2e-12 Identities = 104/142 (73%), Gaps = 6/142 (4%) Strand=Plus/Plus Query 40983 CGACTCGGCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCCGCCA 41042 ||||||||||||| ||||| || | || ||||| ||||| | ||||| |||||| || | Sbjct 599117 CGACTCGGCAGGCATCGATATTAATGGCGCCCGTTCCGTGTTGCAGGATGTTCGCGGCGA 599176 Query 41043 CCGTG------CCCGCCAGGGGTTTCCGCGCGACCACGATCGGCTCAAACGATGGTTTTA 41096 ||||| | |||| || || ||||||| ||||||||| | |||||||| | Sbjct 599177 CCGTGTTGTTTCTATCCAGAGGCTTGCGCGCGAGACAGATCGGCTCCACAGATGGTTTCA 599236 Query 41097 GCGCGGTACCCCAGCCCTGCCA 41118 || || |||||||| |||| Sbjct 599237 AGGCCGTGCCCCAGCCTCGCCA 599258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171510546950724