Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_022975.1 Length=52390 Score E Sequences producing significant alignments: (Bits) Value seq743 80.6 9e-11 >seq743 Length=263205 Score = 80.6 bits (88), Expect = 9e-11 Identities = 150/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 41660 GATTTCGGGAAGCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGATCTCGAAGCCCGCG 41719 || ||||| || || | || || | |||| || |||||||||||| || || ||||| Sbjct 30787 GACTTCGGAAACCCCGTCCCATAAATCCACATGAGCGAGTCGCGGATTTCAAACCCCGCA 30846 Query 41720 TCCTCGATGGC-CACGGTCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGC-AGGT 41777 || ||||| || ||| | || ||||| || ||| || ||||||| || ||| | || Sbjct 30847 TCTTCGATCGCGCAC-GCCATGCGGTGATAGCCGCGCGATGCGCCGAACGC-AGCGACGT 30904 Query 41778 GCCCACCCGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACGTCGAAGGCGA--- 41834 |||| || || || || || |||||| || ||| | || | |||||||| Sbjct 30905 GCCCGCCAGGTTTCAGCACGCGCAGGACTTCGGACCAGAATTCTTCCGAGAAGGCGACCT 30964 Query 41835 TGCCCGAGCCGTCCCACTTCTTGCCCATGAATCC 41868 ||||| |||||| | ||||||||||||||| Sbjct 30965 CGCCCG---TGTCCCATTGCTTGCCCATGAATCC 30995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167523417925376