Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq752 271 2e-68
seq1095 105 2e-18
seq900 98.7 3e-16
seq1494 84.2 6e-12
seq1388 80.6 7e-11
seq812 80.6 7e-11
>seq752
Length=262051
Score = 271 bits (300), Expect = 2e-68
Identities = 293/388 (76%), Gaps = 0/388 (0%)
Strand=Plus/Plus
Query 37125 CCGCAACGCCGCCGCCAAAGAAAATCACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGG 37184
|| |||| || | | || ||||| || |||||| | || | | ||||| |||||
Sbjct 252279 CCACAACTACGTCTCGAAGGAAAAGCATTTCGGCAAGGATGTCTTCCTGACCCGAAAAGG 252338
Query 37185 TGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTC 37244
|| | |||| || ||||| |||||||||||||| || |||||||| ||||||||
Sbjct 252339 CGCGATGTCGGCCAAGGACGGCGAACTGGGCATCATCCCCGGATCGATGGGGGCGAAGTC 252398
Query 37245 ATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGG 37304
|||||||| ||||||||||| ||| | ||| |||||| | ||| ||||| |||||
Sbjct 252399 CTTCATCGTGCGCGGCAAGGGCAATGCGGAAAGCTTCTGCACCTGCTCGCACGGCGCCGG 252458
Query 37305 TCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGC 37364
||| | ||||||||| |||| || || ||||| ||||| |||||||| || | ||
Sbjct 252459 TCGGACCATGAGCCGGACCGAGGCCAAGCGCCGCTTCACGGTCGAGGACCACGTCCGCGC 252518
Query 37365 CACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTA 37424
|||| || ||||||||||||| || ||||||||||||||||| || || ||| ||
Sbjct 252519 CACCGCTGGCGTCGAGTGCCGCAAGGACGCCGAAGTGATCGACGAAACCCCGATGGCCTA 252578
Query 37425 CAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCT 37484
||||||||||| |||||||| || || || ||| |||| | || |||||||||| ||
Sbjct 252579 TAAGGACATCGACGCGGTCATCGCGGCCCAGACCGACCTGATCGAGGTCGTGCACACCCT 252638
Query 37485 GCGCCAAGTCGTTTGCGTGAAGGGTTGA 37512
||| ||||| || ||||| ||||| |||
Sbjct 252639 GCGTCAAGTGGTGTGCGTCAAGGGATGA 252666
>seq1095
Length=1089284
Score = 105 bits (116), Expect = 2e-18
Identities = 99/123 (80%), Gaps = 5/123 (4%)
Strand=Plus/Plus
Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGC---GACCTT-GCCGAAGAACACGACGCG 23594
||||| |||||| | |||||| | |||| |||||| || ||||| ||| |||||
Sbjct 705854 CCCTTTTTCAGATATTGTTCGGCAA-CGCGGCACAGACCTTCGCTGAAGATCACCACGCG 705912
Query 23595 GTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGT 23654
||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct 705913 ATGCCACTCGGTCTTTTCCTTGCGCTCGCCGGTGTTCTTGTCGCGCCAGGTTTCCGACGT 705972
Query 23655 GGC 23657
||
Sbjct 705973 CGC 705975
>seq900
Length=120344
Score = 98.7 bits (108), Expect = 3e-16
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 23580 GAAGAACACGACGCGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTT 23639
||||| |||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 12211 GAAGATGACGACGCGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCCGAGGACTTGTCGCG 12270
Query 23640 CCAGGTTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCG 23699
|||||||||||| || || | | |||| || | |||||||| ||| | ||||
Sbjct 12271 CCAGGTTTCCGAGGTCGCAATCGACAGGTTGGCGATGCGGTCGCCGTTCGGCATGGAGCG 12330
Query 23700 CACTTCCGGGTC 23711
| |||||||||
Sbjct 12331 AATTTCCGGGTC 12342
>seq1494
Length=1074632
Score = 84.2 bits (92), Expect = 6e-12
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 23587 ACGACGCGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTT 23646
|||||||| ||||| ||||||||||||||||| |||||||| | |||||| ||||||
Sbjct 665 ACGACGCGATGCCACTCGGTCTTTTCCTTGCGTTCGCCGGTGTTCTTGTCACGCCAGGTC 606
Query 23647 TCCGACGTGGCCAGGCTGA 23665
|| ||||| || | |||||
Sbjct 605 TCGGACGTCGCGATGCTGA 587
>seq1388
Length=494395
Score = 80.6 bits (88), Expect = 7e-11
Identities = 64/77 (83%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 21060 TGATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTA 21119
|| ||||| ||||||| ||||||||| ||||||| || ||| | ||| || ||||||
Sbjct 18717 TGCTGGCGCACCCGACACGATTCGAACGTGTGACCTTTGCCTTCGGAGGGCAACGCTCTA 18776
Query 21120 TCCAGCTGAGCTACGGG 21136
|||||||||||||||||
Sbjct 18777 TCCAGCTGAGCTACGGG 18793
>seq812
Length=1388629
Score = 80.6 bits (88), Expect = 7e-11
Identities = 62/74 (84%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122
||||| ||||||| ||||||||| ||||||| || ||| | ||| || |||||||||
Sbjct 950961 TGGCGCACCCGACACGATTCGAACGTGTGACCTTTGCCTTCGGAGGGCAACGCTCTATCC 951020
Query 21123 AGCTGAGCTACGGG 21136
||||||||||||||
Sbjct 951021 AGCTGAGCTACGGG 951034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139280720671988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |