Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq249 93.3 2e-14 >seq249 Length=9465 Score = 93.3 bits (102), Expect = 2e-14 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| |||||||||| Sbjct 3402 TGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACCG 3461 Query 50168 AACTGCTCTACTCCGCATTACGGG 50191 |||||| || |||| || ||| Sbjct 3462 GGCTGCTCCACCCCGCGCTATGGG 3485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181599967349538