Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023555.1 Length=43017 Score E Sequences producing significant alignments: (Bits) Value seq1095 210 6e-50 >seq1095 Length=1089284 Score = 210 bits (232), Expect = 6e-50 Identities = 358/505 (71%), Gaps = 22/505 (4%) Strand=Plus/Plus Query 14338 GCGTCGGCCACCCAGTACAATCGCTGTCGGATGTGCGGCGCACCGACGCCCGCAGCGCAT 14397 |||||||||| ||| |||| ||||| | ||| ||||| ||||||||||||||||| Sbjct 151013 GCGTCGGCCAACCAATACAGCCGCTGCCTAGGGTGTGGCGCGCCGACGCCCGCAGCGCAC 151072 Query 14398 AAATCTGCCGCTGCGCTGGCGTATCCCGCGTTTTCCAAGTCAGTTTGTACAATGTCGAGC 14457 | ||| || | ||| ||| |||||| || ||||| ||||| ||| | ||||| Sbjct 151073 AGATCGGCAGTCCCGCAGGCATATCCCAGGTCTTCCAGGTCAGCACGTATTCCGGCGAGC 151132 Query 14458 CAACCGAGGCCGTCCTTGCTTGAAACCTGCTCACCAAAGACGACGCTAGGGCTGCACTGG 14517 || | | ||||||||||| | ||||||||| |||||||||| ||| ||| | | Sbjct 151133 CATTCACGTCCGTCCTTGCTCGCAACCTGCTCTCCAAAGACGATTGAAGGCGAGCAGTCG 151192 Query 14518 CTGATGAGATGGAAGAATGCCGGCCACAGGTGCCGCTCGTCAGC--AACCCCTGCGCCTT 14575 |||||| | || || ||||||||||| | ||||| || ||| |||||||| Sbjct 151193 GCGATGAGGCTGTGAAAAGCGGGCCACAGGTGTCTATCGTCGGCGTGCCCCTTGCGCCTT 151252 Query 14576 TGCCTGCCGCGCTGAAA--GGCTGGCAAGGGCAAGATCCGGTCCAGAC---CGGTCGATC 14630 || | ||| | |||| ||||| || || || ||||||||||| || || ||||| Sbjct 151253 --CCCG-CGC-CCGAAAGCGGCTGACAGGGACAGGATCCGGTCCA-ACATTCG--CGATC 151305 Query 14631 ATCCGGCCATCCTGCGCGGCGCAGGGCG-AGCGACCATACTCCAATTCCGGCGAAGAAGT 14689 |||||||||||||||| | |||| |||| ||| |||| | ||||| ||||||||||| | Sbjct 151306 ATCCGGCCATCCTGCGAGCCGCAAGGCGTAGC-TCCATCCGCCAATCCCGGCGAAGAAAT 151364 Query 14690 GGCACT---GGGTAAATTCGGTGAGTTCATTTGGTGTTATATCCTCGATCGATCGTTCGT 14746 || || | ||| ||| | || | || | | ||| |||| ||| |||| Sbjct 151365 -GCGCTTGCGTGTAGCCTCG--CACGTCGTCGGGCCTGACATCGACGATGCTTCGCTCGT 151421 Query 14747 CAACAATACCAGGGGCGATATGCCCTTCTGCGATAAGATTACGCAGCCATTGCGCGGCGT 14806 |||| || || ||||| |||| | ||||| || || || ||||| ||||| ||| Sbjct 151422 CAACGTCGCCTGGCGCGATGAGCCCGGCAGCGATGAGGTTTCGGAGCCACTGCGCTGCGA 151481 Query 14807 AGGGGTCAATTTCATTGTAATAGGC 14831 | || |||| ||| ||||| || || Sbjct 151482 ACGGATCAAATTCGTTGTAGTACGC 151506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137530351830202