Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023564.1 Length=52974 Score E Sequences producing significant alignments: (Bits) Value seq998 80.6 9e-11 seq316 80.6 9e-11 >seq998 Length=1052685 Score = 80.6 bits (88), Expect = 9e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 5589 TGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGGGTTCCAGGTTCGAGTCCTGG 5648 ||||||||| ||||||||||| ||||||||||| ||| |||| ||||||||||||||| Sbjct 267582 TGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAGTCCTGC 267641 Query 5649 CG 5650 || Sbjct 267642 CG 267643 >seq316 Length=8699 Score = 80.6 bits (88), Expect = 9e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 5589 TGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGGGTTCCAGGTTCGAGTCCTG 5647 ||||||||||||||||||||| ||||||||||| ||| |||| |||||||||| |||| Sbjct 927 TGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGCAGGTTCGAGCCCTG 985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169392184659568