Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq931 322 2e-83 seq998 271 4e-68 seq1095 269 1e-67 >seq931 Length=105225 Score = 322 bits (356), Expect = 2e-83 Identities = 532/762 (70%), Gaps = 7/762 (1%) Strand=Plus/Minus Query 66184 ACCGGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 66242 |||||||| | | |||||| || ||||||||||| || | || | |||| |||| Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314 Query 66243 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 66302 | | || | | |||||| ||||| || || ||| | || ||| || ||| ||||||| Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254 Query 66303 CAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCC 66362 | | |||||| || ||| |||||||| | | ||||| || ||| | |||||||| Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194 Query 66363 TGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 66422 | || ||| || ||| || || | || || | || ||||| ||||| ||||| Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134 Query 66423 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66482 ||||||||||| ||||||||||| ||| || || || |||| || |||||| Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074 Query 66483 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 66542 || || ||||| || || |||||| |||||||| || |||||||||| || || || Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014 Query 66543 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 66602 ||| | || || || || || || ||| ||||| |||||||||| |||| | | Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954 Query 66603 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 66661 ||||||| | || | || | || | |||||||| | || | ||||||||| Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895 Query 66662 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 66721 | || ||||| || || ||||| ||||||||||| || ||| ||||||||||| Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838 Query 66722 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 66781 | || || |||| |||| |||| || | | ||| | ||||||||| ||||||| Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778 Query 66782 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 66841 || |||||| || ||||| |||||||||||| | ||||||||| |||| | | | | Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718 Query 66842 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 66901 || | || ||||||| || |||||||| || ||| || ||||||||| ||| Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658 Query 66902 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66943 | |||| || | ||||| ||||| |||||||| |||| Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616 >seq998 Length=1052685 Score = 271 bits (300), Expect = 4e-68 Identities = 512/750 (68%), Gaps = 5/750 (1%) Strand=Plus/Plus Query 66187 GGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 66246 ||||| ||| || ||| ||| || ||| |||| ||| |||| |||||||||||| Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365 Query 66247 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 66306 || || ||||| || ||||| || || ||| | || ||| || || |||||||| | Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425 Query 66307 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 66366 || |||||| || |||| | |||| ||||||||| || || | |||||||| | Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485 Query 66367 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66426 || ||| |||||| || | |||| | || || | ||||| ||| |||| Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545 Query 66427 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 66486 || ||||| || ||||||| || || || || |||| | || | | | || Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605 Query 66487 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 66546 || || || || || || || |||||||||||||| ||||| || || || || ||| Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665 Query 66547 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATC 66606 | || |||| |||||| | ||| ||||| |||||||||| || | | ||| Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725 Query 66607 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 66666 || || |||| || | ||| |||||||| | ||| ||||||||| ||| Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782 Query 66667 GGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTC 66726 |||||| || || ||||| ||||||||||| || ||| ||||| ||||| ||| Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842 Query 66727 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 66786 ||| | || | || ||||||| | | ||||| |||| |||| |||||||| | Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902 Query 66787 ACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCC 66846 ||||| || ||||| || ||||||||||| || |||||| | | | ||| ||| | Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962 Query 66847 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 66905 || ||||||| ||||| |||| | || || ||| ||||||| || | ||| | Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021 Query 66906 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 66935 ||| | || ||||||| ||||||||||| Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051 >seq1095 Length=1089284 Score = 269 bits (298), Expect = 1e-67 Identities = 505/739 (68%), Gaps = 5/739 (1%) Strand=Plus/Minus Query 66199 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66258 |||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| ||||| Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708 Query 66259 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66318 || ||||| || || ||| | || ||| || || ||||| | || |||||| Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648 Query 66319 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66378 || |||| ||||| |||||| || || ||| | || || || | || ||| | Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588 Query 66379 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66438 ||||| || | ||||| | || || | ||||| ||| ||| |||||||| ||| Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528 Query 66439 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 66498 || || | || || || || |||| | || | | | || | || || ||| Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468 Query 66499 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 66557 || || |||||||| |||||||| ||||||||||| || || || || | |||| | Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409 Query 66558 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA 66617 ||| || || || ||| ||||| |||||||||| || | | | ||| || |||| Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349 Query 66618 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 66677 ||| || | | | |||||||| | ||| ||||||||| ||| || ||| | Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292 Query 66678 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 66737 | || |||||||| |||||||| || ||| ||||||||| || || || | || | Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232 Query 66738 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 66797 ||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || || Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172 Query 66798 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 66857 ||| || |||||||||||||| |||||| | | | ||| ||| | || ||||||| Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112 Query 66858 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 66917 ||||| | ||| || |||| |||||||||| | ||| | ||| | || | Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052 Query 66918 GAAGTCGGGCGCCTGGTTC 66936 |||||||||||||||||| Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243902744044119