Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023692.1 Length=48984 Score E Sequences producing significant alignments: (Bits) Value seq743 100 9e-17 >seq743 Length=263205 Score = 100 bits (110), Expect = 9e-17 Identities = 132/179 (74%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 38535 CCTGCGGATCCTCAAGCCTGGCGGTTACAT-GCTGGCGTTCGGAGGCTCGCGCACCTGGC 38593 |||||| | || || |||||||| || | |||| ||||||| | |||||| || | Sbjct 30930 CCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCTG-CGTTCGGCGCATCGCGCGGCTATC 30872 Query 38594 ACCGGCTCGCGTCTGCGATCGAGGACGCCGGTTTCGAGGTTCGCGACTCGATCGCGTGGC 38653 |||| | |||| |||||||| || || || || || | ||||||||| || |||| Sbjct 30871 ACCGCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCATGTGGA 30812 Query 38654 TGTTCGGTTCCGGGTTTCCGAAGTCGCTCGATGTGTCCAAGGCGATCGAT-AAGCGGCG 38711 | | || | |||||||||||||||| |||||| ||||| ||| ||| |||||||| Sbjct 30811 TTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAGCGGCG 30753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156624411937948