Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_023704.1
Length=51421
Score E
Sequences producing significant alignments: (Bits) Value
seq743 91.5 5e-14
>seq743
Length=263205
Score = 91.5 bits (100), Expect = 5e-14
Identities = 127/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 40382 CGCCGCCTTGTCGATGGCCTTGGACACGTCGAGCGACTTCGGAAACCCGCTGCCGTACAG 40441
|||||| || || || ||||| ||| || |||||||||||||||| | || || |
Sbjct 30753 CGCCGCTTTATCAATCCCCTTGCTCACATCATGCGACTTCGGAAACCCCGTCCCATAAAT 30812
Query 40442 CCACGCGATGGAGTCGCGGATCTCGAAACCGGCGTCCTCAATGGCAACGGTCAGGCGGTG 40501
|||| || ||||||||||| || || || || || || || || | || ||||||
Sbjct 30813 CCACATGAGCGAGTCGCGGATTTCAAACCCCGCATCTTCGATCGCGCACGCCATGCGGTG 30872
Query 40502 CCAGGTGCGCGAACCTCCGAAGGCGAACAGGTGCCCGCCCGGTTTGAGGACTCGCAGG 40559
|| |||||| | ||||| || | ||||||||| ||||| || || ||||||
Sbjct 30873 ATAGCCGCGCGATGCGCCGAACGCAGCGACGTGCCCGCCAGGTTTCAGCACGCGCAGG 30930
Score = 80.6 bits (88), Expect = 9e-11
Identities = 106/143 (74%), Gaps = 8/143 (6%)
Strand=Plus/Plus
Query 40236 TCGATGTTGAGTGCCCCGGTGCCGT-GCGCCAGCACGTTCGCCGCCACGGTGCCCGC--- 40291
|| || || || || || ||||| |||| |||||||| || || || ||||| |
Sbjct 30481 TCAATATTCAGCGCGCCCGTGCCCCAGCGC-AGCACGTTGGCGGCAACCGTGCCTTCTGA 30539
Query 40292 CAGCGGTTTTCGCGCGACCACGATGGGCTCAAAGGCGGGTTTCAGCGCGGTGCCCCAGCC 40351
|||||| || ||||||| || ||||| || ||||||||||| |||||||| ||||| ||
Sbjct 30540 CAGCGGCTTGCGCGCGAGGACAATGGGTTCGAAGGCGGGTTTGAGCGCGGTTCCCCATCC 30599
Query 40352 CTGCCACTGCTTGACGGCATCGG 40374
| ||| || | |||| ||||
Sbjct 30600 TTCCCATTG---GGCGGCTTCGG 30619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164422673121554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |