Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq1155 93.3 4e-14 seq763 87.8 2e-12 >seq1155 Length=1012 Score = 93.3 bits (102), Expect = 4e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 91631 CACCA-CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGG 91689 ||||| |||| ||| | |||| |||| |||||||| ||||||||||| ||| |||||||| Sbjct 433 CACCATCGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGG 492 Query 91690 TTCGAATCCTGTCACCCCGAC 91710 ||||||||||||| |||||| Sbjct 493 TTCGAATCCTGTCTTCCCGAC 513 >seq763 Length=251843 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 114284 GCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGA 114343 ||| |||||| || || |||| |||| ||| ||| || ||||||||||||| | Sbjct 12332 GCCAGGGCCGGGGATCGGCCGCCAACTCGGCCGTCTGCTATGTGCTGGGCATCACCTCCA 12273 Query 114344 TCGACCC-GATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 114402 ||||||| || | ||||||| |||||||||||||| || | ||| |||| ||| Sbjct 12272 TCGACCCTGAACGCA-ACGACCTCCTGTTCGAGCGCTTCGTCTCCGAGGAGCGCCGCGAA 12214 Query 114403 TTCCCCGACATCGACGTCGACTTCCAG 114429 ||||||||||||||||| ||| || Sbjct 12213 CCGCCCGACATCGACGTCGATTTCGAG 12187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492285175633680