Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq720 318 2e-81
seq522 156 1e-32
seq513 145 2e-29
seq1318 89.7 2e-12
>seq720
Length=4951
Score = 318 bits (352), Expect = 2e-81
Identities = 549/790 (69%), Gaps = 37/790 (5%)
Strand=Plus/Minus
Query 69268 TATTTCTATGTAATGCATAGATTTGAACCCGAGACTAGACTTGATTTTATTAAAGATATG 69327
|| || ||||||||||| | ||| | ||| | | || | ||||||||| ||||
Sbjct 1077 TACTTTTATGTAATGCACCGTTTTAATATCGA---TCAAATTAAATTTATTAAAAGTATG 1021
Query 69328 CAAACTCGCAACTTATATGCTTCTATTAGTGTTGGTGTAAAAGAAGAAGAGTATCAATTT 69387
|| | || ||||||||||| ||||| ||||||| ||| |||| || | | ||
Sbjct 1020 CATGAACAAAAGTTATATGCTTCAATTAGCATTGGTGTTAAAAAAGAGGATAAAGAGTTA 961
Query 69388 ATTAATCAATTAGCTGATGAAA----AACTTGTTCCAGAATATATCACTATTGATATAGC 69443
|| | |||||| || ||| | || ||||||||| ||| ||||||||||| ||
Sbjct 960 CTTGAACAATTA----ATCAAACTGAATCTAATTCCAGAATTTATTACTATTGATATTGC 905
Query 69444 TCACGGACATTCTAATGCTGTTATTAAAATGATTCAACATATAAAGAAGATGTT------ 69497
|| || ||| ||||||| | |||||||| || |||||| | | ||
Sbjct 904 ACATGGTCATAGTAATGCTATGGAAGAAATGATTAAATTTATAAAAACTACTTTTGCTAA 845
Query 69498 ACCAAATAGT------TTTGTTATTGCTGGTAATGTTGGTACACCTGAAGCTGTTCGTGA 69551
| |||||| | ||| ||||||||||||| ||| ||| |||||| ||
Sbjct 844 AACAAATACTAAACCTTTTATTATTGCTGGTAACGTTATGACAAAAACCGCTGTTAAAGA 785
Query 69552 ACTTGAAAATGCAGGCGCAGATGCTACAAAAGTTGGTATTGGCCCAGGTAAAGTATGTAT 69611
| ||||| |||||| ||||| | ||| ||||| |||||||||| |||| |||||
Sbjct 784 TTTAGAAAAATGAGGCGCTGATGCAATTAAATTTGGTGTTGGCCCAGGAAAAGCTTGTAT 725
Query 69612 TACTAAAATCAAAACTGGTTTTGGTACTGGCGGCTGGCAGTTAGCTGCATTGCGTTGGTG 69671
||||||| | |||||||| |||||||| || || || || ||| ||| || | | ||
Sbjct 724 TACTAAACTAAAAACTGGATTTGGTACAGGTGGTTGACAATTAAATGCTTTACAA-GATG 666
Query 69672 TT--CAAAAGTAGCTACTAAACCAATAATTGCTGATGGTGGTATTCGTACTAACGGTGAT 69729
|| ||| || | | ||||||||| ||||||| |||||||||||| | ||| ||||||
Sbjct 665 TTGCCAATAGCACC-ACTAAACCATTAATTGCAGATGGTGGTATTAGATGTAATGGTGAT 607
Query 69730 ATTGCTAAATCTGTACGTTTTGGCGCTTCAATGGTTATGATTGGTTCGCTATTTGCGGGT 69789
||||||||| | || |||||| || | ||| ||||| || | || ||||||
Sbjct 606 ATTGCTAAAGCAATAGCTTTTGGTGCCACTATGATTATGGCAGGAAGTATTTTAGCGGGT 547
Query 69790 CACGAGGAATCACCAGGTGAGACGATAGaaaaaaaTGGTAAATTATATAAAGAGTATTTT 69849
| || |||||||| || | | | || ||||||| ||| || ||||| ||||||
Sbjct 546 TATGATGAATCACCTGGCAAAATTGTTACAATAAATGGTCAATCTTACAAAGAATATTTT 487
Query 69850 GGATCCGCTTCTGAATATCAAAAGGGTGAAAAGAAGAACGTTGAAGGAAAGAAGATACAT 69909
||||| || | | | | || | ||| ||| || ||||||| || || |||| |
Sbjct 486 GGATCAGCAAGTATTTTTAACAAAGCGGAAGCGAAAAATATTGAAGGTAAAAAAATACTT 427
Query 69910 GTAGAATGTAAAGGGAGTTTGAA----AGATACGTTGATTGAAATGGAACAAGATCTTCA 69965
|| || |||||| || || ||||| | | ||||||||| ||||| | ||
Sbjct 426 GTTCCATATAAAGG----TTCAATTGCTGATACTTATAAAGAAATGGAAGAAGATTTACA 371
Query 69966 ATCTTCAATTTCTTATGCTGGTGGTAAAGATTTATTAGCAATTA-GAAATGTAGATTATG 70024
|||| | |||||||||||||||||||||||||||| ||| | | |||||| |||||||
Sbjct 370 ATCTGCTATTTCTTATGCTGGTGGTAAAGATTTATCTGCATTAACAAAATGT-GATTATG 312
Query 70025 TCGTTGTTAA 70034
| |||||||
Sbjct 311 TTATTGTTAA 302
>seq522
Length=6543
Score = 156 bits (172), Expect = 1e-32
Identities = 206/283 (73%), Gaps = 11/283 (4%)
Strand=Plus/Plus
Query 182240 GAGCTTTACCTGATGCAAGAGACGGATTAAAACCATCACAACGTCGAATTTTATATGCTT 182299
|||||||||| ||||||||||| ||||| |||||| ||| ||||||||||||||| |||
Sbjct 4194 GAGCTTTACCAGATGCAAGAGATGGATTGAAACCAGTACATCGTCGAATTTTATATTCTT 4253
Query 182300 TATGGGATTTAGGAATGCTACCTCATAAACCATATCGAAAATCAGCA-ACAGTGAATGGC 182358
|| |||||| ||| | | ||||||| ||| |||| ||||| | || |
Sbjct 4254 TAGCAATTTTAGGTATGACATATGATAAACCTTATAAAAAAGCAGCACGTATTGTTGGAG 4313
Query 182359 CACGTAATGGGTAATTTCCATCCACATGGTGATA------CTTATGGTGTAATGGTAAAT 182412
| ||| ||| ||||| ||||| |||||||||| ||||| ||||||||
Sbjct 4314 AATGTATTGGAAAATTT-CATCCTCATGGTGATATTGCAGTTTATGAAACAATGGTAAGA 4372
Query 182413 ATGACAAATGAATTAAGTATTCGATATCCAGTAGTTGATGGTCAGGGTAACTTTGGTAAC 182472
||| || | ||||| | | ||| ||||| ||| |||||| || ||||| ||||||
Sbjct 4373 ATGGCACAAGAATTTAATTATCGTTATCCTTTAGCTGATGGCCAAGGTAATTTTGGT--- 4429
Query 182473 CCATTAGATGGTGATGGTGCAGCAGCGATGCGTTATACTGAAG 182515
|| | ||||||||| |||| || || ||| | ||||||||||
Sbjct 4430 TCAATTGATGGTGATAGTGCTGCTGCTATGAGATATACTGAAG 4472
Score = 138 bits (152), Expect = 4e-27
Identities = 279/410 (68%), Gaps = 23/410 (6%)
Strand=Plus/Plus
Query 180782 TTTACCAGGGAAATTAGCTGATTGTACTTCTAAA------ACTTATTCTGAACTATATAT 180835
|||||| || |||||||| |||||| |||||||| ||| | | ||| | | | |
Sbjct 3351 TTTACCTGGTAAATTAGCAGATTGTTCTTCTAAAGATCCAACTAAAACAGAAGTTTTTCT 3410
Query 180836 TGTAGAAGGTGATTCTGCTGGTGGTTCTGCTAAGTCCGGAAGAAATCGTTACTACCAAGC 180895
||| |||||||| || |||||||| |||| |||| ||||||| | | | |||||
Sbjct 3411 TGTCGAAGGTGAGTCAGCTGGTGGAACTGCAAAGTTGGGAAGAAGTAGAGAAATTCAAGC 3470
Query 180896 AATATTATCATTACGTGGCAAAATCTTAAACGTGGAGAAA--AGTAGTTTAGAAAGAATG 180953
||| ||| ||||| | || ||||| | || || || ||| | | ||| |||| |
Sbjct 3471 AATTTTACCATTAAGAGGGAAAATAATTAATGTTGAAAAAGCACGACTTTTAAAAGTTTT 3530
Query 180954 CT-TAACTCTGAAATGATTAAGAATATCATAGGTGCAGTTGGTACTGGCATTGATTCGCC 181012
| | || ||||| | ||| ||| || | | ||||| ||| ||| |
Sbjct 3531 TTCTGACGAAGAAATAAATAATCTTATTAT---TTCCTTTGGTTGTGGTGTTGGT----- 3582
Query 181013 AGGACAAAAGTTCGAATATGAA-AAATTGCGATATGATAAAATTATTTTCATGTGTGATG 181071
| | || || ||||| | ||||| || ||| ||||||||||| | ||| |||||
Sbjct 3583 ---AAAGAATTT--AATATTACTAAATTACGTTATCATAAAATTATTATTATGACTGATG 3637
Query 181072 CTGATGTCGATGGTTCTCATATTGAAGCACTACTACTAACGTTATTCTATAATTATATGA 181131
||||||| || ||||| |||||| || || || || |||| || || ||| ||| |||
Sbjct 3638 CTGATGTTGACGGTTCACATATTAAAACATTATTATTAACATTTTTTTATCGTTACATGC 3697
Query 181132 GACCATTAATTGAAAAAGGGCATGTATATGCGGCTCAGCCACCATTATAT 181181
| || |||||||| || || ||||| ||||| || || ||||||
Sbjct 3698 GTCCCTTAATTGATGCTGGTTATATATATATAGCTCAACCTCCTTTATAT 3747
>seq513
Length=6546
Score = 145 bits (160), Expect = 2e-29
Identities = 416/628 (66%), Gaps = 30/628 (5%)
Strand=Plus/Minus
Query 53990 TATGGCGATTTCAAAGTTTTATAAAGATTATGCTTTAAAAACA---AACGATAAAAAATT 54046
||||| |||| ||| |||||||| |||||||||||||| || | |||| |||
Sbjct 1753 TATGGGTATTTTAAAATTTTATAATTCTTATGCTTTAAAAAGTTTTAATGGTAAACAAT- 1695
Query 54047 CTACTTAGAATCTTATGAAGATCGTATTGCTATTGTTTCTTTATTCTTAGGACAAGGTAA 54106
| |||||| |||||||||| | ||| ||| | |||||| || | | |||||
Sbjct 1694 --ATTTAGAAAATTATGAAGATAGAGTTGTTATGAATAGTTTATTTTTCGCTGATGGTAA 1637
Query 54107 T-TTCAATAA---AGCAAAAAGTTTAGCTGTTTCTATGATTGAACAAAGATACCAACCAG 54162
| || || | || |||| || || | |||| || |||| |||||||
Sbjct 1636 TATTGAACATGCTAGTAAAATTTTAAGACAAAT-TATGTCTGGT---AGATTTCAACCAG 1581
Query 54163 CTACTCCAACTTTCCTAAATGCTGGTAGAAGCAGACGCGGAGAAATGGTTTCTTGTT-TC 54221
||||||| || || ||||||| || | || | | || ||| ||| |||| ||
Sbjct 1580 CTACTCCCACATTTTTAAATGCAGGAAAAAAACAAAGAGGTGAATACACTTCATGTTATC 1521
Query 54222 TTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCAATATCAATACTGCAATGCAA 54281
|| ||| ||| || |||| | || | ||||||| | | ||| | |||| || | ||
Sbjct 1520 TT-TTACGAATTGAAGATAACATGGAATCAATTGCTCGCGCTATTACTACTTCATTACAG 1462
Query 54282 TTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCTAAACTTAGAGGAAGAAAAGAG 54341
||||| ||| |||||| || ||||| || | | || | |||| | ||
Sbjct 1461 TTATCAAAACGTGGCGGTGGAGTTGCTTTGTGTTTAACAAATTTAAGAGAATTTGGAGCT 1402
Query 54342 CAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTACCAGTTATGAAACTTTTAGAA 54401
| ||||||| |||| | || || | || || | |||||||||||| || | |||
Sbjct 1401 CCAATTAAAAATATTAAAAATCAAGCAACAGGCGTTATCCCAGTTATGAAAATTCTTGAA 1342
Query 54402 GATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAAGGCGCTGGAGCTGTTTACTTA 54461
||| || || ||||||||||| || || |||||| |||| ||||| || ||||| |||
Sbjct 1341 GATTCATTTTCATATGCTAATCAACTAGGTCAAAGACAAGGTGCTGGGGCAGTTTATTTA 1282
Query 54462 AA----CATCTTCCACTGGGATATTATTGAATTCTTAGATACTAAAAAGATCAATGCTGA 54517
|| |||| |||| |||||||| ||| |||||| | || ||||| ||
Sbjct 1281 AATGTTCATCATCCA----GATATTATGTTATTTTTAGATTCAAAGCGTGAAAATGCAGA 1226
Query 54518 TGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTA---ATTGCTGAAAAAATCTTCTT 54574
||||||| | ||| |||| | ||| | ||| || ||| |||| | | || ||
Sbjct 1225 TGAAAAAATTCGTATTAAATCAATGTCTTTAGGAGTAGTTATTCCTGATATTA-CT--TT 1169
Query 54575 CCAATTAGCAAAAAGAAACGAAGAAATG 54602
|||||||||||| || ||| | |||
Sbjct 1168 TGAATTAGCAAAAAACAATGAACAGATG 1141
>seq1318
Length=12988
Score = 89.7 bits (98), Expect = 2e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 403938 TGTGCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTTC 403997
|||| ||| ||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct 1830 TGTGTGCCCGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTC 1771
Query 403998 GAATCCTACCAGGC 404011
|||||||||| |||
Sbjct 1770 GAATCCTACCGGGC 1757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591879825868352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |