Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_023724.1
Length=62991
Score E
Sequences producing significant alignments: (Bits) Value
seq97 123 1e-23
seq752 95.1 5e-15
seq998 82.4 3e-11
seq316 82.4 3e-11
>seq97
Length=479585
Score = 123 bits (136), Expect = 1e-23
Identities = 143/190 (75%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 36538 CGACGTCGTGAACCACCCGGCGCACTACA-CGTCGCACCCCAGCGGCGTCGAGTGCATCA 36596
|||| |||||||| ||| || || |||| || | ||||| ||||| |||| ||||||
Sbjct 255927 CGACAACGTGAACCGCCCAGCACATTACAACGGC-CACCCAAGCGGTATCGAATGCATCC 255869
Query 36597 CCGTCACCGAGCACATGGGCTTCAACCTCGGCAACGCCGTTAAGTACATCTGGCGCTGCG 36656
| ||||||| ||| ||||||| ||||| || ||| | || ||||||||||||||||
Sbjct 255868 AGATAGCCGAGCATATGAGCTTCAATCTCGGAAATGCCCTAAAATACATCTGGCGCTGCG 255809
Query 36657 ACTTGAAGCGCGACGCGATCGAGGATCTGCGCAAGGCACGGTTCTACATCGACCGCGAAA 36716
| |||||| ||||| || || || ||| || || || | ||||||||||| ||||
Sbjct 255808 ATCTGAAGCAAGACGCAATTGAAGACCTGGAGAAAGCCCGTTGGTACATCGACCGGGAAA 255749
Query 36717 TCGCGAAACG 36726
|| ||| ||
Sbjct 255748 TCAAGAAGCG 255739
>seq752
Length=262051
Score = 95.1 bits (104), Expect = 5e-15
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 51999 CTGCCGTTCGTGCATCCGCACGTTGCCCTCATGCCCGACGCGCACGTCGGCAAAGGTTCG 52058
||||||||| | ||| || || || |||||||||||| |||| |||| || ||
Sbjct 251557 CTGCCGTTCATCCATAAACATGTCGCGGTCATGCCCGACGTGCACTGGGGCATGGGGGCG 251616
Query 52059 TCTGTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGTGTCGAC 52118
| || ||| |||| ||||| ||| || || |||| |||||||| || || || |||
Sbjct 251617 ACGGTGGGTTCCGTGATCCCGACCGTGGGGGCGATCATTCCCGCCGCCGTGGGCGTGGAC 251676
Query 52119 ATCGGCTGCGGCATGATCGC 52138
||||||||||||||||| ||
Sbjct 251677 ATCGGCTGCGGCATGATGGC 251696
>seq998
Length=1052685
Score = 82.4 bits (90), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTGC 652
||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct 267584 TAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAGTCCTGC 267641
>seq316
Length=8699
Score = 82.4 bits (90), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTGC 652
||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||
Sbjct 929 TAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGCAGGTTCGAGCCCTGC 986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 201442719763128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |