Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq1191 93.3 3e-14 >seq1191 Length=688723 Score = 93.3 bits (102), Expect = 3e-14 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 94876 TCTGTAACCACGGGCTGGAGAAGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACAT 94935 ||||| || ||||| || || || ||||| |||| || || ||| |||| ||| Sbjct 597379 TCTGTCACGACGGGTGTCAGCAGATGCGGGATGCCGTCATAGACGGAGAGTTCGAG-CAT 597437 Query 94936 -TTGGGGTCGATCATGATGAGTTTGACCC-GATCAGGGGTCGCCCGGTAGAGCAGCGAAA 94993 || ||||||| ||||||||| ||| | | || || || ||||||||||||||| | Sbjct 597438 CTTCGGGTCGACCATGATGAGGC-GACACTGGTCGGGCCTCAGCCGGTAGAGCAGCGACA 597496 Query 94994 CCAGCATTGAGTTGATGAAGCTGGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGAT 95053 | ||| | ||| ||| | ||||||||||| ||||| | ||| || | |||||||| Sbjct 597497 GGATCATGGTGTTAATGCCGACCGACTTGCCCGAGCCGGTGGTGCCGGCGATCAGCAGAT 597556 Query 95054 GCGGCAT 95060 ||||||| Sbjct 597557 GCGGCAT 597563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340115386297232