Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_024329.1 Length=39425 Score E Sequences producing significant alignments: (Bits) Value seq20 80.6 7e-11 >seq20 Length=12842 Score = 80.6 bits (88), Expect = 7e-11 Identities = 143/207 (69%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 14746 CAACTGGTGGTGATGCTAATAGAAAAGCATTAAATATTCATAATGCTGT--TGTTATTAA 14803 ||||||||||||| | ||| | |||||||||||||| ||| ||||||| | || | Sbjct 7491 CAACTGGTGGTGACCCAAATCGCAAAGCATTAAATATACATCATGCTGTAATAGTAACAG 7432 Query 14804 TCAAGCCTTTTTAAATGCAGTTAGATATGATGAAAGCTGGTATTTAATTAACCCAGATAG 14863 ||| ||| | | || ||| | ||||| || ||| ||||||| | ||| ||| Sbjct 7431 ATAAG--TTTATGCAAGCTGTTGAAGATGATCAAGAATGGGATTTAATAAGCCCTCATAA 7374 Query 14864 TAATGATGTGGTAGATAAAGTAATTGCTCGTGATTTATATAAACAAATCTTAACAACAAG 14923 ||| | || | | ||||| || || ||| ||| | |||| |||||| |||| Sbjct 7373 CAATAAAGTTATTTCAACAGTAAAAGCACGGGATATATGGATTAAAATATTAACAGCAAG 7314 Query 14924 ACACCAAACTGGTGAGCCTTATATTAT 14950 | ||||||| || ||||||||||| Sbjct 7313 AATTGAAACTGGAGAACCTTATATTAT 7287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126036156437706