Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_024366.1
Length=62661
Score E
Sequences producing significant alignments: (Bits) Value
seq97 122 3e-23
seq998 84.2 9e-12
seq316 84.2 9e-12
>seq97
Length=479585
Score = 122 bits (134), Expect = 3e-23
Identities = 127/164 (77%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 36570 CACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACATGGGCTTCAACCTCGGCAAC 36629
||||| || || | || |||||| ||| ||||||| ||| ||||||| ||||| ||
Sbjct 255893 CACCCAAGCGGTATCGAATGCATCCAGATAGCCGAGCATATGAGCTTCAATCTCGGAAAT 255834
Query 36630 GCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACGCGATCGAGGATCTGAAAAAG 36689
||| | |||||||||||||||||||| ||||| | ||||| || || || ||| | ||
Sbjct 255833 GCCCTAAAATACATCTGGCGCTGCGATCTGAAGCAAGACGCAATTGAAGACCTGGAGAAA 255774
Query 36690 GCCGCGTT-CTACGTCGACCGTGAAATCGCGAAGCGTGAGCGGG 36732
||| |||| ||| ||||||| |||||| |||||| ||||||
Sbjct 255773 GCC-CGTTGGTACATCGACCGGGAAATCAAGAAGCGAAAGCGGG 255731
>seq998
Length=1052685
Score = 84.2 bits (92), Expect = 9e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 828 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTGC 886
|||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct 267583 GTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAGTCCTGC 267641
>seq316
Length=8699
Score = 84.2 bits (92), Expect = 9e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 828 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTGC 886
|||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||
Sbjct 928 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGCAGGTTCGAGCCCTGC 986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200386739055258
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |