Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_025429.1
Length=156446
Score E
Sequences producing significant alignments: (Bits) Value
seq890 208 8e-49
seq1482 150 2e-31
seq743 147 2e-30
>seq890
Length=125401
Score = 208 bits (230), Expect = 8e-49
Identities = 381/552 (69%), Gaps = 26/552 (5%)
Strand=Plus/Minus
Query 142241 TCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGA 142300
||||||||| ||||| || || ||||||| | ||||| || | || |||| ||||
Sbjct 47693 TCTTCGGTCGCCAGATTCGCTTTGATCTGGCCAAGGGCTTCCCCGTCCTGACCACCAAGA 47634
Query 142301 AGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACA 142360
||||||| ||| ||||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct 47633 AGCTGCACCTGCGTTCGATCATCATCGAACTGCTGTGGTTCCTGCGCGGCGAGACCAACA 47574
Query 142361 TCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCA 142420
|| | || | || || |||| ||||||||||||||||| || ||| | |||
Sbjct 47573 TCGGCTGGCTCAAGGAGAACGGCGTCCGCATCTGGGATGAATGGGCAGACGCCGAGGGCG 47514
Query 142421 ACCTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAG 142480
| || || || ||||| |||||||||||| || ||||| | ||| |||
Sbjct 47513 AGCTTGGCCCCGTCTATGGCAAGCAGTGGCGCTCGTGGAC----------GGCGCCGGA- 47465
Query 142481 ATGACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACTTGAAGAAGT 142540
| || | || ||| | |||| ||| | || || || | | | ||||
Sbjct 47464 CGGCCGCCTCA-TCGACCAAATCG---AGA--AACTGGTTC---ACGGGC-TCAAGACCA 47415
Query 142541 CTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGG 142600
||| | |||||| |||||||||| ||| |||||||| || || || ||||||||||
Sbjct 47414 ATCCGAACGGTCGTCGCCACATCGTCAGCGCCTGGAACCCGGCGGACGTGGACGACATGG 47355
Query 142601 CACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCG-ACTCGAAGAAGCGTCTGTCA 142659
| || || ||||| ||| ||||||| ||| ||||| | || | || ||
Sbjct 47354 CCCTGCCGCCGTGCCACTGCCTGTTCCAGTTCTTCGTCGCAGACGGAAAA----CTCAGC 47299
Query 142660 TGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCG 142719
|||||||||||||||||| || ||| ||||| ||||| ||||||||||| || ||
Sbjct 47298 TGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTCC 47239
Query 142720 TACGCGCTTCTCACACAGCTCATTGCTCGCGAATGCGGTCTGGAACTCGGAGACTTCGTC 142779
||||| || || || | | | | || | | |||||||| | || || ||||||
Sbjct 47238 TACGCCCTGCTGACCCTGATGGTGGCCCAGGTCGTGGGTCTGGAGCCGGGCGAGTTCGTC 47179
Query 142780 CACACCTTCGGC 142791
|| |||||||||
Sbjct 47178 CATACCTTCGGC 47167
>seq1482
Length=483770
Score = 150 bits (166), Expect = 2e-31
Identities = 333/495 (67%), Gaps = 32/495 (6%)
Strand=Plus/Plus
Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302
||||| ||||||| ||| |||| |||| ||| || || || ||| | |||||||||
Sbjct 421465 TTCGGCCATCAGACGCGCCACAATTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAAG 421524
Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362
|| || || |||||| || || || || ||||| || || ||||| || ||||||
Sbjct 421525 CTATCCCTCAAATCGATCGTCCATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATC 421584
Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422
||||| || | || ||| |||| |||||||||||| ||||| || | || ||| |
Sbjct 421585 AAGTACCTCAAGGACCACGGCGTCTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGAT 421644
Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAGAT 142482
||||| || ||||| || ||||||| || ||| | || ||| ||
Sbjct 421645 CTCGGTCCGGTCTATGGTTCGCAGTGGCGTTCATGG------CCCG----CGCCGG---- 421690
Query 142483 GACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACTTGA---AGAAG 142539
|| | || | | ||||||||||| |||| | | | || ||| |
Sbjct 421691 ------ACGGCCGCAGC-ATCGATCAGAT-CGCC--AACGTCGTCGAGATGATCCGGCGC 421740
Query 142540 TCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATG 142599
||| |||| || || | |||||| | |||||||| || || || ||||| | |||
Sbjct 421741 AATCCGGATTCGCGGCGGCTGATCGTCTCGGCGTGGAATCCCGCCGAGGTCGATAAGATG 421800
Query 142600 GCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGAC-TCGAAGAAGCGTCTGTC 142658
|| || || ||||| || |||| || ||| | |||| | || || |||||
Sbjct 421801 GCGCTGCCCCCGTGCCATTGCCTGTTTCAGTTCTATGTCGCCAACGGCAAA----CTGTC 421856
Query 142659 ATGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTC 142718
|||||||| |||||||| || || || ||||||||||| ||||||||||| || ||
Sbjct 421857 GTGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGGCGTGCCGTTCAACATCGCATC 421916
Query 142719 GTACGCGCTTCTCAC 142733
|| ||||| || ||
Sbjct 421917 CTATGCGCTGCTGAC 421931
>seq743
Length=263205
Score = 147 bits (162), Expect = 2e-30
Identities = 328/494 (66%), Gaps = 30/494 (6%)
Strand=Plus/Minus
Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302
||||||||||||||||| ||||| || || || ||||| | | || || |||
Sbjct 73453 TTCGGTCATCAGATGCGCTTCAACCTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAG 73394
Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362
|||| | ||| |||| || |||||| |||||||| ||| ||||| || ||| |
Sbjct 73393 CTGCCGTTCAAGGCGATTGTCCACGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTG 73334
Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422
||||| || || | |||| |||||||| || ||||| || ||||| || |
Sbjct 73333 CGCTATCTGCAGAATAATGGTGTCACCATCTGGGACGAGTGGGCGGACGCCAACGGGGAT 73274
Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAGAT 142482
|| || || |||||||||||||||||| || ||| | ||| ||| |
Sbjct 73273 CTTGGTCCGGTCTACGGCAAGCAGTGGCGCTCATGGCAGG----------CGCCGGA--T 73226
Query 142483 GACGTCACAGACGAACCGATCG---ATCAGATCCGCCGGATCATTACTGACTTGAAGAAG 142539
| | || ||| | ||||| | | |||||| |||| ||
Sbjct 73225 GGCCGCAGCATCGACCAGATCGCGAACCTCATCCGCATGATCCGCACCA----------- 73177
Query 142540 TCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATG 142599
| || |||| || || | ||||||| ||| ||||| || || || ||||| |||||
Sbjct 73176 -CGCCGGATTCGCGGCGGCTGATCGTCAGCGCATGGAATCCGGCCGATGTCGATCACATG 73118
Query 142600 GCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCA 142659
|| || || || || || ||||||| ||| |||||| |||| || ||
Sbjct 73117 GCGCTGCCGCCATGCCATTGCCTGTTCCAGTTCTACGTCG---CGAACGGCAAACTCTCG 73061
Query 142660 TGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCG 142719
|||||||| |||||||||||||| ||| ||| |||||||| ||||||||||| || ||
Sbjct 73060 TGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATCGCGTCC 73001
Query 142720 TACGCGCTTCTCAC 142733
|| ||||| || ||
Sbjct 73000 TATGCGCTGCTGAC 72987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500489821896240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |