Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_025431.1
Length=45718
Score E
Sequences producing significant alignments: (Bits) Value
seq812 259 1e-64
seq1494 228 2e-55
seq191 206 8e-49
seq724 127 6e-25
seq1095 82.4 2e-11
>seq812
Length=1388629
Score = 259 bits (286), Expect = 1e-64
Identities = 368/518 (71%), Gaps = 0/518 (0%)
Strand=Plus/Minus
Query 7915 CGCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTT 7974
|| |||| ||| || |||| ||||| || |||| ||||| |||| || ||||| ||
Sbjct 872494 CGGTTCGGGACCATTTTGGCCGATCCGCCGTGGCAGTTTCAAAACAAAACCGGCAAGATT 872435
Query 7975 GCACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCG 8034
|| || ||||| || || ||||| ||||| || |||| | || |||||| |
Sbjct 872434 GCGCCTGAGCATAAGCGGCTCGCGCGCTACGGCACCATGACGCTCGCCGACATCGAGAAG 872375
Query 8035 TTGCCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCC 8094
||||| || | ||||| | | || | | ||| | ||||| ||||| || ||||||
Sbjct 872374 TTGCCGGTAGGCGAGATTGCAGCCGATACTGCGCATTTGTATCTCTGGGTTCCCAACGCC 872315
Query 8095 CTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACATC 8154
| ||| |||| || ||| || |||| |||||||||||||| ||||| ||||||
Sbjct 872314 ATGCTGCCGGACGGCCTGCGGGTCATGGAGGCGTGGGGCTTCAAGTACAAGGGCAACATC 872255
Query 8155 GTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTC 8214
| ||||||||||| || || |||||||| | || || |||||||||||||| || ||
Sbjct 872254 ATCTGGCACAAAATTCGGAAGGACGGCGGCCCGGATGGGCGCGGCGTCGGCTTCTACTTT 872195
Query 8215 CGGAATGTGACCGAGATTATCCTGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCA 8274
||||| ||||| ||||| | || || || | || || |||||| | || || ||
Sbjct 872194 CGGAACGTGACTGAGATGCTTCTCTTCGGCGTACGCGGCAAGAACGCCCGCACGCTGGCG 872135
Query 8275 CCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAACCA 8334
|| || |||||||| || |||| ||| | ||| |||||||||||| ||||||||
Sbjct 872134 CCAGGCCGCACCCAGGTCAACTTCATGGCCACGCGCAAGCGGGAGCACAGCCGCAAACCC 872075
Query 8335 GATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGT 8394
|| || | || ||||||||||| ||||| ||| | || |||| | || |||||||
Sbjct 872074 GACGAGCAGTACCCAATCATCGAGGCGTGCTCGCCCGGTCCGTTCTTCGAGCTTTTTGCG 872015
Query 8395 CGCGGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCA 8432
||||| | || || ||| | |||||||||||
Sbjct 872014 CGCGGGCCACGCAAAGGCTGGACCGTCTGGGGCAATCA 871977
>seq1494
Length=1074632
Score = 228 bits (252), Expect = 2e-55
Identities = 380/549 (69%), Gaps = 5/549 (1%)
Strand=Plus/Minus
Query 7893 GCTCCGCTGGTCAGCCGGGCACCGCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTT 7952
||| ||||||||||| ||| || |||| |||| || || |||||||||| ||
Sbjct 945270 GCTTCGCTGGTCAGCG-----CCGATTTTCGACAATTCTTGCCGACCCTCCTTGGCAGTT 945216
Query 7953 TCAGAACAGCACAGGCAAAGTTGCACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTT 8012
||||| || ||||| ||||| || ||||| || ||| ||||||||||| |
Sbjct 945215 CACGAACAAGACCGGCAAGGTTGCGCCGGAGCATAAGCGACTTTCGCGCTATGGCACCAT 945156
Query 8013 GTCGCTTCCAGAGATCGAGGCGTTGCCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCT 8072
| ||| || ||| | | | || || ||||| || | | | || || ||
Sbjct 945155 GAAGCTCGATGAAATCATGATGCTACCTGTGGCGGATATAGCTGCACCCACGTCACACCT 945096
Query 8073 TTATCTATGGGTACCGAACGCCCTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGG 8132
||| || ||| || || || || ||| | ||||| || | |||||| ||||||||
Sbjct 945095 TTACCTTTGGTGCCCCAATGCGCTGCTGCCTGAAGGTTTGGCGGTGATGAAAGCGTGGGG 945036
Query 8133 CTTCACATACAAATCGAACATCGTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGG 8192
||||| || ||||| || || |||||||||||| ||||||| |||||||| || || ||
Sbjct 945035 CTTCAACTATAAATCCAATATTGTGTGGCACAAAGTCCGCAAGGACGGCGGCTCTGATGG 944976
Query 8193 TCGCGGCGTCGGCTTTTATTTCCGGAATGTGACCGAGATTATCCTGTTTGGGACAAAGGG 8252
||||||||| || || ||||| || ||||| || || | ||| ||||||| ||
Sbjct 944975 TCGCGGCGTAGGATTCTATTTTCGTAATGTAACTGAAGTAATCTTGTTTGGTGTGCGCGG 944916
Query 8253 AAAAAACGCCAGAACACTCGCACCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAA 8312
|||||||| | || || || || || || ||||||||| | | | ||| ||
Sbjct 944915 GAAAAACGCGCGCACGCTTGCGCCGGGGCGGCGCCAAGTGAATTTATTGGCCACGCGCAA 944856
Query 8313 GCGGGAGCACTCACGCAAACCAGATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGG 8372
||| ||||| |||||||| |||||||| | || || ||||| | || ||| | ||
Sbjct 944855 GCGTGAGCATTCACGCAAGCCAGATGAGCAATACGAGATTATCGAGTCCTGCTCGCCGGG 944796
Query 8373 CCCGTATCTGGAACTTTTTGGTCGCGGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCA 8432
|| | ||| ||||| |||| || |||| | ||| |||||||| |||||||||||
Sbjct 944795 GCCATTTCTTGAACTGTTTGCGCGGGGTACCCGCAAGAACTGGGCGACGTGGGGCAATCA 944736
Query 8433 AGCGGACGA 8441
|| || ||
Sbjct 944735 GGCTGATGA 944727
>seq191
Length=470810
Score = 206 bits (228), Expect = 8e-49
Identities = 362/527 (69%), Gaps = 0/527 (0%)
Strand=Plus/Minus
Query 7915 CGCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTT 7974
|||||||||||| ||||||| || || || |||| ||| |||| || ||||| ||
Sbjct 166062 CGCTTCGCGACGATTCTGGCCGACCCGCCGTGGCAGTTTACCAACAAGACCGGCAAGGTC 166003
Query 7975 GCACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCG 8034
||||| |||||| || | ||||| | |||| || ||| || ||| |||
Sbjct 166002 GCACCCGAGCACAAGCGGTTGTCGCGCTACGACACGATGAAGCTCGACGAAATCAGCGCG 165943
Query 8035 TTGCCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCC 8094
| || || || || |||| | | | ||||||| ||||| ||| || || ||
Sbjct 165942 CTTCCGGTGGCTGATATCGCTGCACCGACGGCTCATCTCTATCTGTGGTGTCCAAATGCA 165883
Query 8095 CTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACATC 8154
|| ||| | ||||| || |||||||| |||||||||||||| || || ||||| |||
Sbjct 165882 CTGCTGCCCGAAGGGCTCGCCGTGATGAAGGCGTGGGGCTTCAACTATAAGTCGAATATC 165823
Query 8155 GTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTC 8214
|| ||||| || |||||||| ||||| || || ||||| ||||| ||||| || |||||
Sbjct 165822 GTCTGGCATAAGATCCGCAAGGACGGTGGCTCGGACGGGCGCGGAGTCGGATTCTATTTT 165763
Query 8215 CGGAATGTGACCGAGATTATCCTGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCA 8274
|| ||||| || || ||||| |||| ||| ||||| || || | || || ||
Sbjct 165762 CGCAATGTCACTGAACTTATCTTGTTCGGGGTGCGTGGAAAGAATGCGCGGACGCTAGCG 165703
Query 8275 CCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAACCA 8334
|| || | || |||||| | ||| |||||| || || || ||||| ||
Sbjct 165702 CCGGGAAGGCGACAGGTGAACCTTTTGGGGACGCGGAAGCGTGAACATTCCCGCAAGCCC 165643
Query 8335 GATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGT 8394
|| |||| || || || ||| | || || |||| |||| | || | || |
Sbjct 165642 GACGAACAATACGAGATTATTGAAACCTGCTCACCAGGGCCGTTCGTCGAGTTGTTCGCA 165583
Query 8395 CGCGGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCAAGCGGACGA 8441
||||||| | ||| ||||| ||||||||||||||||| |||||
Sbjct 165582 CGCGGTACGCGTAAGAACTGGGCAACTTGGGGCAATCAAGCTGACGA 165536
>seq724
Length=279373
Score = 127 bits (140), Expect = 6e-25
Identities = 164/225 (73%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 11631 GCGATCTACTTCCCCCACAACCTCGACTTCCGTGGCCGAGCCTACCCGGTG----CCGGA 11686
|| |||||||||||||||| |||||||||||| ||||| | ||| ||| || ||||
Sbjct 202656 GCCATCTACTTCCCCCACAGCCTCGACTTCCGAGGCCGGGTCTATCCGCTGGCGACCGGC 202597
Query 11687 TGTCCTGAACCCGCAGGGCAGCGACCCCGTTAAGGCGCTTCTCAGGTTCGCCGAGGGGAA 11746
| ||| | |||||||||| || || ||||| || || | |||||||| || |
Sbjct 202596 GGACCTCA-CCCGCAGGGCGATGATGTCGCCAAGGCTCTGCTGACCTTCGCCGATGGTCA 202538
Query 11747 GCCTCTCGGGGCGGATGGCGCGCGCTGGCTCATGATCCACGGCGCGAACACGTTCGGCAT 11806
|| || | || ||||| |||||||| ||||||| ||| | |||||||||
Sbjct 202537 TCCGATCACCGAAGACGGCGCCCGCTGGCTGGCGATCCACCTTGCGGGCCTGTTCGGCAT 202478
Query 11807 CGACAAGGTGTCCTTCACCGAGCGCGTCGAGTGGGTTCAGGAGAA 11851
||||||||| || ||| |||||| ||| ||||||| | ||| ||
Sbjct 202477 CGACAAGGTATCGTTCGACGAGCGTGTCCAGTGGGTGCGGGACAA 202433
>seq1095
Length=1089284
Score = 82.4 bits (90), Expect = 2e-11
Identities = 71/87 (82%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628
||||| ||| ||||||||||||| |||| | ||||||| | |||| | |||| |||
Sbjct 879711 GCGGGCGTGGCGGAATTGGTAGACGCGCTGGATTTAGGTTCCAGTGAC-GAAAGTTGTGG 879653
Query 8629 GGGTTCGAGTCCCTCTACCCGCACCAG 8655
||||||||||||||| ||||||||||
Sbjct 879652 GGGTTCGAGTCCCTCCGCCCGCACCAG 879626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146173397975840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |