Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq812 259 1e-64 seq1494 228 2e-55 seq191 206 8e-49 seq724 127 6e-25 seq1095 82.4 2e-11 >seq812 Length=1388629 Score = 259 bits (286), Expect = 1e-64 Identities = 368/518 (71%), Gaps = 0/518 (0%) Strand=Plus/Minus Query 7915 CGCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTT 7974 || |||| ||| || |||| ||||| || |||| ||||| |||| || ||||| || Sbjct 872494 CGGTTCGGGACCATTTTGGCCGATCCGCCGTGGCAGTTTCAAAACAAAACCGGCAAGATT 872435 Query 7975 GCACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCG 8034 || || ||||| || || ||||| ||||| || |||| | || |||||| | Sbjct 872434 GCGCCTGAGCATAAGCGGCTCGCGCGCTACGGCACCATGACGCTCGCCGACATCGAGAAG 872375 Query 8035 TTGCCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCC 8094 ||||| || | ||||| | | || | | ||| | ||||| ||||| || |||||| Sbjct 872374 TTGCCGGTAGGCGAGATTGCAGCCGATACTGCGCATTTGTATCTCTGGGTTCCCAACGCC 872315 Query 8095 CTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACATC 8154 | ||| |||| || ||| || |||| |||||||||||||| ||||| |||||| Sbjct 872314 ATGCTGCCGGACGGCCTGCGGGTCATGGAGGCGTGGGGCTTCAAGTACAAGGGCAACATC 872255 Query 8155 GTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTC 8214 | ||||||||||| || || |||||||| | || || |||||||||||||| || || Sbjct 872254 ATCTGGCACAAAATTCGGAAGGACGGCGGCCCGGATGGGCGCGGCGTCGGCTTCTACTTT 872195 Query 8215 CGGAATGTGACCGAGATTATCCTGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCA 8274 ||||| ||||| ||||| | || || || | || || |||||| | || || || Sbjct 872194 CGGAACGTGACTGAGATGCTTCTCTTCGGCGTACGCGGCAAGAACGCCCGCACGCTGGCG 872135 Query 8275 CCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAACCA 8334 || || |||||||| || |||| ||| | ||| |||||||||||| |||||||| Sbjct 872134 CCAGGCCGCACCCAGGTCAACTTCATGGCCACGCGCAAGCGGGAGCACAGCCGCAAACCC 872075 Query 8335 GATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGT 8394 || || | || ||||||||||| ||||| ||| | || |||| | || ||||||| Sbjct 872074 GACGAGCAGTACCCAATCATCGAGGCGTGCTCGCCCGGTCCGTTCTTCGAGCTTTTTGCG 872015 Query 8395 CGCGGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCA 8432 ||||| | || || ||| | ||||||||||| Sbjct 872014 CGCGGGCCACGCAAAGGCTGGACCGTCTGGGGCAATCA 871977 >seq1494 Length=1074632 Score = 228 bits (252), Expect = 2e-55 Identities = 380/549 (69%), Gaps = 5/549 (1%) Strand=Plus/Minus Query 7893 GCTCCGCTGGTCAGCCGGGCACCGCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTT 7952 ||| ||||||||||| ||| || |||| |||| || || |||||||||| || Sbjct 945270 GCTTCGCTGGTCAGCG-----CCGATTTTCGACAATTCTTGCCGACCCTCCTTGGCAGTT 945216 Query 7953 TCAGAACAGCACAGGCAAAGTTGCACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTT 8012 ||||| || ||||| ||||| || ||||| || ||| ||||||||||| | Sbjct 945215 CACGAACAAGACCGGCAAGGTTGCGCCGGAGCATAAGCGACTTTCGCGCTATGGCACCAT 945156 Query 8013 GTCGCTTCCAGAGATCGAGGCGTTGCCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCT 8072 | ||| || ||| | | | || || ||||| || | | | || || || Sbjct 945155 GAAGCTCGATGAAATCATGATGCTACCTGTGGCGGATATAGCTGCACCCACGTCACACCT 945096 Query 8073 TTATCTATGGGTACCGAACGCCCTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGG 8132 ||| || ||| || || || || ||| | ||||| || | |||||| |||||||| Sbjct 945095 TTACCTTTGGTGCCCCAATGCGCTGCTGCCTGAAGGTTTGGCGGTGATGAAAGCGTGGGG 945036 Query 8133 CTTCACATACAAATCGAACATCGTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGG 8192 ||||| || ||||| || || |||||||||||| ||||||| |||||||| || || || Sbjct 945035 CTTCAACTATAAATCCAATATTGTGTGGCACAAAGTCCGCAAGGACGGCGGCTCTGATGG 944976 Query 8193 TCGCGGCGTCGGCTTTTATTTCCGGAATGTGACCGAGATTATCCTGTTTGGGACAAAGGG 8252 ||||||||| || || ||||| || ||||| || || | ||| ||||||| || Sbjct 944975 TCGCGGCGTAGGATTCTATTTTCGTAATGTAACTGAAGTAATCTTGTTTGGTGTGCGCGG 944916 Query 8253 AAAAAACGCCAGAACACTCGCACCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAA 8312 |||||||| | || || || || || || ||||||||| | | | ||| || Sbjct 944915 GAAAAACGCGCGCACGCTTGCGCCGGGGCGGCGCCAAGTGAATTTATTGGCCACGCGCAA 944856 Query 8313 GCGGGAGCACTCACGCAAACCAGATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGG 8372 ||| ||||| |||||||| |||||||| | || || ||||| | || ||| | || Sbjct 944855 GCGTGAGCATTCACGCAAGCCAGATGAGCAATACGAGATTATCGAGTCCTGCTCGCCGGG 944796 Query 8373 CCCGTATCTGGAACTTTTTGGTCGCGGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCA 8432 || | ||| ||||| |||| || |||| | ||| |||||||| ||||||||||| Sbjct 944795 GCCATTTCTTGAACTGTTTGCGCGGGGTACCCGCAAGAACTGGGCGACGTGGGGCAATCA 944736 Query 8433 AGCGGACGA 8441 || || || Sbjct 944735 GGCTGATGA 944727 >seq191 Length=470810 Score = 206 bits (228), Expect = 8e-49 Identities = 362/527 (69%), Gaps = 0/527 (0%) Strand=Plus/Minus Query 7915 CGCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTT 7974 |||||||||||| ||||||| || || || |||| ||| |||| || ||||| || Sbjct 166062 CGCTTCGCGACGATTCTGGCCGACCCGCCGTGGCAGTTTACCAACAAGACCGGCAAGGTC 166003 Query 7975 GCACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCG 8034 ||||| |||||| || | ||||| | |||| || ||| || ||| ||| Sbjct 166002 GCACCCGAGCACAAGCGGTTGTCGCGCTACGACACGATGAAGCTCGACGAAATCAGCGCG 165943 Query 8035 TTGCCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCC 8094 | || || || || |||| | | | ||||||| ||||| ||| || || || Sbjct 165942 CTTCCGGTGGCTGATATCGCTGCACCGACGGCTCATCTCTATCTGTGGTGTCCAAATGCA 165883 Query 8095 CTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACATC 8154 || ||| | ||||| || |||||||| |||||||||||||| || || ||||| ||| Sbjct 165882 CTGCTGCCCGAAGGGCTCGCCGTGATGAAGGCGTGGGGCTTCAACTATAAGTCGAATATC 165823 Query 8155 GTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTC 8214 || ||||| || |||||||| ||||| || || ||||| ||||| ||||| || ||||| Sbjct 165822 GTCTGGCATAAGATCCGCAAGGACGGTGGCTCGGACGGGCGCGGAGTCGGATTCTATTTT 165763 Query 8215 CGGAATGTGACCGAGATTATCCTGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCA 8274 || ||||| || || ||||| |||| ||| ||||| || || | || || || Sbjct 165762 CGCAATGTCACTGAACTTATCTTGTTCGGGGTGCGTGGAAAGAATGCGCGGACGCTAGCG 165703 Query 8275 CCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAACCA 8334 || || | || |||||| | ||| |||||| || || || ||||| || Sbjct 165702 CCGGGAAGGCGACAGGTGAACCTTTTGGGGACGCGGAAGCGTGAACATTCCCGCAAGCCC 165643 Query 8335 GATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGT 8394 || |||| || || || ||| | || || |||| |||| | || | || | Sbjct 165642 GACGAACAATACGAGATTATTGAAACCTGCTCACCAGGGCCGTTCGTCGAGTTGTTCGCA 165583 Query 8395 CGCGGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCAAGCGGACGA 8441 ||||||| | ||| ||||| ||||||||||||||||| ||||| Sbjct 165582 CGCGGTACGCGTAAGAACTGGGCAACTTGGGGCAATCAAGCTGACGA 165536 >seq724 Length=279373 Score = 127 bits (140), Expect = 6e-25 Identities = 164/225 (73%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 11631 GCGATCTACTTCCCCCACAACCTCGACTTCCGTGGCCGAGCCTACCCGGTG----CCGGA 11686 || |||||||||||||||| |||||||||||| ||||| | ||| ||| || |||| Sbjct 202656 GCCATCTACTTCCCCCACAGCCTCGACTTCCGAGGCCGGGTCTATCCGCTGGCGACCGGC 202597 Query 11687 TGTCCTGAACCCGCAGGGCAGCGACCCCGTTAAGGCGCTTCTCAGGTTCGCCGAGGGGAA 11746 | ||| | |||||||||| || || ||||| || || | |||||||| || | Sbjct 202596 GGACCTCA-CCCGCAGGGCGATGATGTCGCCAAGGCTCTGCTGACCTTCGCCGATGGTCA 202538 Query 11747 GCCTCTCGGGGCGGATGGCGCGCGCTGGCTCATGATCCACGGCGCGAACACGTTCGGCAT 11806 || || | || ||||| |||||||| ||||||| ||| | ||||||||| Sbjct 202537 TCCGATCACCGAAGACGGCGCCCGCTGGCTGGCGATCCACCTTGCGGGCCTGTTCGGCAT 202478 Query 11807 CGACAAGGTGTCCTTCACCGAGCGCGTCGAGTGGGTTCAGGAGAA 11851 ||||||||| || ||| |||||| ||| ||||||| | ||| || Sbjct 202477 CGACAAGGTATCGTTCGACGAGCGTGTCCAGTGGGTGCGGGACAA 202433 >seq1095 Length=1089284 Score = 82.4 bits (90), Expect = 2e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628 ||||| ||| ||||||||||||| |||| | ||||||| | |||| | |||| ||| Sbjct 879711 GCGGGCGTGGCGGAATTGGTAGACGCGCTGGATTTAGGTTCCAGTGAC-GAAAGTTGTGG 879653 Query 8629 GGGTTCGAGTCCCTCTACCCGCACCAG 8655 ||||||||||||||| |||||||||| Sbjct 879652 GGGTTCGAGTCCCTCCGCCCGCACCAG 879626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146173397975840