Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq1045 114 3e-21 seq900 86.0 1e-12 >seq1045 Length=73698 Score = 114 bits (126), Expect = 3e-21 Identities = 177/249 (71%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 18299 ACCGAAGGGTTGCGCAGCCGTTACC-GCCAGAAGCAACTGGTGGCCAC---GGGTAAGAG 18354 |||||||| |||||| | || ||| | || ||| ||||| | ||| | || | || Sbjct 32624 ACCGAAGGCTTGCGCT-CGGTCACCCGGCAAAAGGAACTGTTTGCCGCCAAGGCGACGA- 32567 Query 18355 CCAGACCATGAACAGCCGCCACCTTACGGGGCATGCCGTGGATGTTGTGGCTTATATCGG 18414 |||||||||||||||| ||||| || || |||||||| ||||| | ||| |||| Sbjct 32566 --AGACCATGAACAGCCGACACCTGACCGGCCATGCCGTTGATGTGGCCGCTCTGGTCGG 32509 Query 18415 CAGCCAGGTGTCATGGGAATGGCCGCTGTACGAAAAAATCGCAGCAGCATTCAGACAGGC 18474 | |||||||| ||||| ||||||||||| |||| || || |||| |||||| Sbjct 32508 CGGCCAGGTGCGCTGGGACTGGCCGCTGTATTCGCGCGTCGCCGCCGCGTTCAAACAGGC 32449 Query 18475 CAGCCGGGAACTGAATATTCCGGTGGAATGGGGCGGCGACTGGAAGACTCTGAAAGACGG 18534 | ||| || | || | | |||||||||||||||||||| |||| ||||| Sbjct 32448 GGCGCTGGAGTTGGGGACGCCCATCGTCTGGGGCGGCGACTGGAAGACGTTGAAGGACGG 32389 Query 18535 ACCGCATTT 18543 ||||| || Sbjct 32388 CCCGCACTT 32380 >seq900 Length=120344 Score = 86.0 bits (94), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 18353 AGCCAGACCATGAACAGCCGCCACCTTACGGGGCATGCCGTGGATGTTGTGGCTTATATC 18412 |||| |||| ||| || ||||| || || ||||| || ||||| | ||| ||| Sbjct 21893 AGCCGGACCCAGAAGTCGCGTCACCTGACCGGCCATGCGGTCGATGTGGCGGCCCTGATC 21834 Query 18413 GGCAGCCAGGTGTCATGGGAATGGCCGCTGTACGAAAAAATCGCAGCAGCATTCAGACAG 18472 | | | |||||| ||||| ||||||||||||| ||||| | || |||| || Sbjct 21833 GACGGTCAGGTGCGGTGGGACTGGCCGCTGTACGGCCGGATCGCCGAGGCGTTCA---AG 21777 Query 18473 GC--CAGCCG-GGAACTGAATATTCCGGTGGAATGGGGCGGCGACTGGAAGACTCTGAAA 18529 || | |||| ||| ||||| | ||| | | |||||||||||||||| | |||| Sbjct 21776 GCGGCGGCCGCGGACCTGAAGACGCCGATCGTCTGGGGCGGCGACTGGACCAGTCTGCGC 21717 Query 18530 GACGGACCGCATTT 18543 || ||||||||||| Sbjct 21716 GATGGACCGCATTT 21703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114481162127488